UFO06467.5prime Sequence
1125 bp (1029 high quality bases) assembled on 2009-08-18
> UFO06467.5prime
CAGTCGACATGTCATCCTGGATCACAGGACTGGCGGACAAGGCCGAAAAC
ATTTTGAACAAGCTGGACCAAAATGCGGCAACGGCCCTGCAGACAGAGAA
CGCCACAGGTTCAGCGGATCCCATGCGTAGGAGCATGACGAGCAGCACCC
AATCACTGTCCACATCCCTGAAGTCCACTCTGTCGCCAGTGCGGCGCTCG
GGGGCCAATAGCTCATCAAGTGTAAAAAGCGATGGCGGGGTCTCCGTGGT
CACTAAGGACATGCGCCAAAAGATGACCACGTCGGCCAGTTTCTCCAACA
GTCCCGACATATCCGCCAACTCAATGGACACAAATGAATTGGCTGCCTTC
AAGATCGCCCTGAATGAAATCACGGCCGAAAGAGATGAACTGCGTCTGCG
CTTGGAAGATCTTAATAACGAAACCGAAAAGTTTGATCTGCATCAACACA
CCCAGGTGCTGGAAGCTCTGGTTAAAAGTCTGTCCGAAGAGCGGGACAAG
GCGGTTCATGACTACAATGAGGCCCAGGCAGCTAACATGGCGTATGTGCA
CTCCATCTCCGAACTGGAAACCAATCTGGCCAAGTTGCAGCAGGAATACA
TAAGCGCCGCTCACAAATTGCAAATGCAAACAAAGGAGACGGAGCAGCAG
CGCCAGGAGCTTCAGGAATACCGTATCAAGGCTCAGCGAGCTCTGCAAGC
AAAGGATTCCCTCATCGCAGAGTTGAAGGCGAAGCCCACGGAGGAGGGCG
CAGATCCAAACCTGGTGTCCAAGGACAGTGAAACGCGTTTTCTGCAAATT
GAACACGAGTCACTTAAGCAAGAACTAGAGCATGCCAACGAGGAACTGCA
AAAGGCGCGCTTGCAGCTGGACGATTACGTTTCCCAGGAAAGACAACGAC
AGGTGGAACTAAGCTCTGCCCGCCAACGCGAGGAAACACTAGCAAAGGAG
TTGCGACAGGCAGGACCACAGTGTGACCTCCGATCCGATCAGCGAGTGCT
CACGCAGGACTGGCCTCACTGCGCAGCACTAAGTACCAAATGGCTGCTGC
CGCCACTCGACTCAGAGCGGGAGCAGCAGCTTCAGCGATGCTTCAGCGAA
TGGAGCGAGGAGCCACCGGACCAGA
UFO06467.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Golgin84-RA | 1814 | CG17785-RA | 63..1174 | 9..1111 | 5225 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24356776..24357876 | 1099..9 | 5000 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:05:46 has no hits.
UFO06467.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:56 Download gff for
UFO06467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Golgin84-RA | 48..1164 | 9..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:58 Download gff for
UFO06467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Golgin84-RA | 63..1179 | 9..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:32 Download gff for
UFO06467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Golgin84-RA | 63..1179 | 9..1115 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:32 Download gff for
UFO06467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24356760..24357876 | 9..1115 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:58 Download gff for
UFO06467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20182482..20183598 | 9..1115 | 98 | | Minus |
