UFO06475.5prime Sequence
1122 bp (1003 high quality bases) assembled on 2009-08-18
> UFO06475.5prime
CAGTCGACATGGGCGTTCCTGCTGGTGATGTTGAGAAGGGAAAGAAGCTG
TTCGTGCAGCGCTGCGCCCAGTGCCACACCGTTGAGGCTGGTGGCAAGCA
CAAGGTTGGACCCAATCTGCATGGTCTGATCGGTCGCAAGACCGGACAGG
CGGCCGGATTCGCGTACACGGACGCCAACAAGGCCAAGGGCATCACCTGG
AACGAGGACACCCTGTTCGAGTACCTGGAGAACCCCAAGAAGTACATCCC
CGGCACCAAGATGATCTTCGCCGGTCTGAAGAAGCCCAACGAGCGCGGCG
ATCTGATCGCCTACCTGAAGTCGGCGACCAAGGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATG
ATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAAT
ATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACG
TTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAA
CATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAAC
ACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTA
TTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGCAAACGTGTAA
CAGGGTGAACACTATCCCATATCACAGCTCACCGTCTTTCATTGCCATAC
GAAATTTCGATGAGCATCATCAGCGGCAGATGTGATAAAGGCGAATAAAC
TGTGCTTATTTTCTTTACGTCTTAAAGCGTAAATCCAGCTGACCGGCTGT
TAAGGTACTGGACACTGACTGA
UFO06475.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyt-c-p-RB | 634 | CG17903-RB | 40..363 | 9..332 | 1620 | 100 | Plus |
| Cyt-c-p-RA | 681 | CG17903-RA | 87..410 | 9..332 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16722050..16722373 | 9..332 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:05:31 has no hits.
UFO06475.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:10 Download gff for
UFO06475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-c-p-RA | 141..471 | 1..336 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:46 Download gff for
UFO06475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-c-p-RA | 83..413 | 1..336 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:22 Download gff for
UFO06475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-c-p-RA | 83..413 | 1..336 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:22 Download gff for
UFO06475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16722046..16722373 | 1..332 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:46 Download gff for
UFO06475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16722046..16722373 | 1..332 | 98 | == | Plus |
