UFO06479.5prime Sequence
1112 bp (1023 high quality bases) assembled on 2009-08-18
> UFO06479.5prime
CAGTCGACATGGCCACAAACGAGAGCTGCAAGCACTTCAGGGAGCTGGTC
GTCGAACAGCGTTCTGGGCTGCTCCACATACGCTTCCAGCGGCGCTGGCA
ACGCCGAACCCTCTACGAGCTGATGCGCGCCCTGGACCTGGCGAGTGCAG
ACGCCGCCGTTAAGGTGGTCGTGCTCTCGGGCGAGTTTTCTGCAGCATGT
GGCGGTGAGATGGAACCGTTGGCTCTCAAACAGGGTCTGGAGAATAGGAG
TAGGCGTACCGCTTCCCACGAAGAAGCTGTGGGCAGTGGTGATGCCGAGG
AGCAGTACATCCATGAGAAGGCGGCCAATTTTGTGATGCGCTCGCTGGCC
AAGAAGCTGCTTGTGCACCGCAAACTCCTAGTGGCTTTTGTGGAGAGGCA
GTGCGTCGGTCTGGGCCTGAGCGTGTGCAGCCTGTGCGATCTGGTCTTCG
CAACGGAGTTATCTGCCTTTGTGCCCGCTTTCTCGCACCTGGATCCCTGC
ACCAAGGTGGGTCCCGGCTGGACTGTGCCACACGTCCACTGGCTGCTTCG
TCTGGGCGATCAAGCGAGCTCCAGCATTGCCCTCCAGTGTGGCCTTGTGG
CCAGTGTGGTGCGAGAGCCGCAGGAGTTTTGGCACCGCGTCGACCAATAC
TTGCGCTTGCCTTCCGCCTCCCTGTTGGCGACAAAGCGCCTCCTGTTTCG
TCCCTGGCAGGACTCCCTCTTGGCCGAATTGCGCGAGGAGGGCACTCCGC
TGGCTGCGCAGCGACGCCGCTTGGCCAGATCCTCGCTGGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGGATTCTCACAATAAAAACGCCCGGCGCAACCGAGCGTTCTGACAA
ATCCAGATGGAGTTCTGAGTCATTACTGGATCTATCACAGGAGTCAGCGA
GCTCGATATTCAATACGCCCCGCCTGCCCCTCATCGCAGTACTGTTGTAT
CATAGCATTCTGCGACTGAAGCCATCAAACGGCATGATGACTGATTCGCA
AGCGATCAGACC
UFO06479.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-RA | 870 | CG14787-RA | 32..811 | 9..788 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1460866..1461645 | 788..9 | 3900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:53:41 has no hits.
UFO06479.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:23 Download gff for
UFO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 18..809 | 1..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:17:42 Download gff for
UFO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 27..818 | 1..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:06 Download gff for
UFO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 27..818 | 1..796 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:06 Download gff for
UFO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1460859..1461650 | 1..796 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:17:42 Download gff for
UFO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1354892..1355683 | 1..796 | 99 | | Minus |
