UFO06487.5prime Sequence
1102 bp (971 high quality bases) assembled on 2009-08-18
> UFO06487.5prime
CAGTCGACATGGCCCACTACAAAGGTGCCGCCAGCGAGGCGGGCCGTGCA
GCCCAGCTGATGAAGAAGCGGGAGATCCAGCAGCAGGAGATCGAGTTTCG
CAAGAAGAAGATCGAGGAGGAGCTCAAGCTGGACAAGATTGAGAACAAGT
TTGCCACCCACTACGATGCCGTGGAGCAGCAGCTCAAGTCCTCGACCATT
GGTCTGGTCACCCTCGACGAGATGAAGGCCAAGCAGGAGGATATAGTGCG
GGAACGGGAGAAGAAGCTCGCCCAGAAGAAGGACGAAAAGGATCGGGAGA
AGCAGCGCGCCCTGGAGGCCATTCAGGCGGAGAAGAACAAGCAGAAGCGG
CAGATCCAGGCGCTGTCCTTCAACCTGGACGACGACGAGGAGGAGGAGGA
GGAGGACGACGAGGATCACGATAAGAAACAGCTGAAGATTAAGCAGGAGG
ATCAGCCCAAGCCCAAGTGGACGGAGATCAAGGAAGACATTTTGCCCATA
AAGAAGAAGAAGATATGCAAGAATCCTGACGTGGACACTTCCTTTCTGCC
AGATCGCGAGCGCGAGGAGCAGGAGAACAGACTGCGCGAGCAGCTGCGTC
AAGAATGGGTAATGCAGCAGGCGGAGCTGAAGGACGAGGACATCTCCATC
ACGTTCAGCTACTGGGATGGCTCCGGCCATCGGCGGAACGTGCTGATGAA
GAAGGGCAACTCCATCTACCAGTTTCTGCAGAAGTGCCTGGAGCTGCTGC
GCAAGGAGTTCATCGAACTGAAGACCGTAATGGCCGACCAGCTGATGTAC
GTCAAGGAGGATCTGATCCTGCCGCACCACTATTCCTTCTACGACTTTAT
CGTGACCAAGCACGCGGCAAATCCGGCCCGCTCTTCCAGTTCGACGTCCA
CGACGATGTGCGCATGATAGCGACGCTCCGTGGAGAAGAGAGTCCCATGC
CGGAAAGTACTCCTCCGCTCCTGTACGAGCGCACAGCACATCTTCCCAGC
AGCGATGGAGCCTACGATCCCACCAGTCTACGACAGTACCCATCAGACAG
GATAGAGTAAAGCAAGCTTCTAGACATTCGTTGGCCCGGACAGGTATGGC
TA
UFO06487.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12259-RA | 1246 | CG12259-RA | 96..1169 | 9..1061 | 4855 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27919994..27920994 | 1000..9 | 4595 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:53 has no hits.
UFO06487.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:22 Download gff for
UFO06487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 93..1149 | 2..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:40 Download gff for
UFO06487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 93..1149 | 2..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:40 Download gff for
UFO06487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27919941..27920997 | 2..1045 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:22 Download gff for
UFO06487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23745663..23746719 | 2..1045 | 98 | | Minus |
