UFO06490.5prime Sequence
1105 bp (1007 high quality bases) assembled on 2009-08-18
> UFO06490.5prime
CAGTCGACATGCAGGAGCAGGAGATGGAGGTGGAAGTGGGGGACCCGGCA
AAGGCGTCGAATTTGCTGCGGCTCATCAAGCAGCTGCTGCTGGAAAAAGC
TTACGATGGCGTGCGGATGTTGTTTCAAAGTGCCCAGGAATCGGAAAAGA
ACACTCGGCTGCTGCCCCACATAGCCATGGATCTATACCATGACGTGTGC
TTGGAAAACATTTCCGACGAGGTGAACTCCCAGGAGCCAGAACTATTCGA
CTGCTCTGACGAGCTGCTCAAGCTGCTGGCCAAGTACGCCCCACTGCATG
AGCTTATGCTGGAACTGATGGAGCGCTTGGAAGAGAGTAGCAGTATCAAT
GTGTTCGGCGCCTATCTGCGGGCCCTACAAGTTGTGCTGCAGCGACAGGG
ACGCGACAAGCCGCAGGCCGTTGAGTGGAGCCTGAATAGCATCTTCACCC
ATCTCAAGGATTTGCCCCTGCCCGAATACCTCTCCGAGGGCTATGACGAG
GCCCAAGCGCGACTCATAGAGCAAAACGAACAGGTGGAGGACCTTCTGGC
TCACTACATCACCGTGGGACTCTTTCGGGAGCCGCTCCGCGATGAAATTC
TGCAGCAGGATGTGCGGACACCCAGCCAAATATTCAGGGATTGCGGCGTC
AACCGGCGCAACATATTCACTTGCTTCTTCATTCAGCTGTTGGGACGTCC
GTTGGCCCTGCTGGAGATGAATCACGCCAAGGAGGACCTTACGAGATCCT
ACGTGCAGCAGTTACGGAAAGCCTGACTCAGGATGCCAACCAGTTCCTGG
GGGATCCCTTCTACCTGCTCAACCTCGTGGAACAGCGTGCCAGATGGCTA
ACGAAACTAGATGCCTCGAGAGGCGTCTACGAGATGAGTTGCCAGAATGT
TTTCCTCATCGAGGAGAACTTCCGCTGCATGCTGTAGCCATGTACTATCA
CTCGCTGTCGTGGGTAACCAACTGCCCACAACGCACAAAGGTATATGCAC
CTTTATTCTATCGAACGATTGTCTATTCTGGCTGAGTGCTACTCAGCAGC
AGGAGCTCCCTACATATTGGTGGTCTCGATTATGAACATCATTTGAGTAC
TTGCA
UFO06490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30496-RA | 2379 | CG30496-RA | 143..1254 | 9..1105 | 5080 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7699642..7700646 | 9..1008 | 4760 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:03:06 has no hits.
UFO06490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:13 Download gff for
UFO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30496-RA | 139..1249 | 9..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:00 Download gff for
UFO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30496-RA | 143..1253 | 9..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:00 Download gff for
UFO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30496-RA | 143..1253 | 9..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:00 Download gff for
UFO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7699642..7700752 | 9..1104 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:00 Download gff for
UFO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3587147..3588257 | 9..1104 | 98 | | Plus |
