UFO06491.5prime Sequence
1126 bp (990 high quality bases) assembled on 2009-08-18
> UFO06491.5prime
CAGTCGACATGGCCAAAACGCCCCCGCTCCGCCCCCACGGTAACATGGCC
AAATTCCTGGCAGCCCTCGGCATCTGCTCTTGGCTCCTCGTTTCGGCCAC
CGCTCACAACTGCCAACACCAGCATCCAAAGGCCCACGAGGTCGTCCATG
GCGTGCGCATCCAACTGGCTGATAGCGAAGATGACTCCGCCGGAGATCCA
GCGAGGCATAGCGTCCGACGGCGCAGCGTTGCCGCCGAGCAGCCACTGCG
AATTCTGCTCGTCTACGACGAATCCGTCTACAGGCTGGAAGAAGAGAAAT
TTAATTTGATAAATGACACCGTTCTCCCGGAAGCCGTGCAGTTCTGGGAA
CAGGCCCTGATGGTGCGAGAGACCAAGGGCGTTATCCGACTCAATAGGAA
ATGCGACAGCACGCAGGTGTACGTGAAAAACGGACACACCCACTGCATCG
ACCATTGCAAGGCGACGACGATGTGCGGCGAGGTTCAGGTGCCCGATGCG
CACTTGGATGTATGTCGGGTGTGCAATGCCACGGGTCAGAATTGTAGAAT
CGATAGTAACACACAGCCGGGCGAAGGAATTGAGAATGCGGACTTTGTGT
TCTACGTGTCCGCCAGGCAGACGCAGCGTTGTTTCAAGGGTCTAACCGTT
GCCTATGCGGCCCATTGTCAACAGGAAGCGGCTCTGGATCGTCCAATCGC
CGGTCATGCGAATCTCTGTCCGGAGAGCATTAGCACAAAGCCGCAGGAAC
TGCAGACACTGATCTCCACCGTAAAGCACGAGATTCTCCATGCACTGGGA
TTCTCCGTGAGCTTGTACGCATTCTTTAGGGACGATGATGGAAAACCCCG
AACGCCCCGAAAATTAGACACTGGCAAGCCGTACCTGAATGAAAAATTGC
AGATCCATCAGTGGAGCAACGAGACCATTCGCAAGGTGGTGCGAGAGAAC
TGGTCTGTGCGTGGTGGCCATGTTAACAAGGTAGTGACATGATGGTCACG
CCCTCGCGTAATTGCCGAGGGGCGCGCCCACTTTACTGCATAGTGGAGGG
CGCGACCTGGAAGAACAGGTGGGAGTACCGCCCCTGACTCCACTGGCAAG
GCATCTGGAAATGAGGCATGACTGAA
UFO06491.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Invadolysin-RA | 3610 | CG3953-RA | 733..1862 | 8..1124 | 5135 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10156576..10156961 | 510..895 | 1930 | 100 | Plus |
| 3R | 32079331 | 3R | 10154222..10154367 | 139..284 | 730 | 100 | Plus |
| 3R | 32079331 | 3R | 10145400..10145534 | 8..142 | 675 | 100 | Plus |
| 3R | 32079331 | 3R | 10157017..10157156 | 896..1035 | 590 | 97.9 | Plus |
| 3R | 32079331 | 3R | 10155975..10156091 | 396..512 | 585 | 100 | Plus |
| 3R | 32079331 | 3R | 10155822..10155905 | 315..398 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:55:25 has no hits.
UFO06491.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:12 Download gff for
UFO06491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Invadolysin-RA | 699..1751 | 1..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:55:35 Download gff for
UFO06491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Invadolysin-RA | 730..1782 | 1..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:00 Download gff for
UFO06491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Invadolysin-RA | 730..1782 | 1..1053 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:00 Download gff for
UFO06491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10155977..10156088 | 398..509 | 100 | -> | Plus |
| 3R | 10155712..10155742 | 284..314 | 100 | -> | Plus |
| 3R | 10155822..10155904 | 315..397 | 100 | -> | Plus |
| 3R | 10145397..10145532 | 1..140 | 97 | -> | Plus |
| 3R | 10154224..10154366 | 141..283 | 100 | -> | Plus |
| 3R | 10156576..10156961 | 510..895 | 100 | -> | Plus |
| 3R | 10157017..10157178 | 896..1053 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:55:35 Download gff for
UFO06491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5971119..5971254 | 1..140 | 97 | -> | Plus |
| arm_3R | 5979946..5980088 | 141..283 | 100 | -> | Plus |
| arm_3R | 5981434..5981464 | 284..314 | 100 | -> | Plus |
| arm_3R | 5981544..5981626 | 315..397 | 100 | -> | Plus |
| arm_3R | 5981699..5981810 | 398..509 | 100 | -> | Plus |
| arm_3R | 5982298..5982683 | 510..895 | 100 | -> | Plus |
| arm_3R | 5982739..5982900 | 896..1053 | 95 | | Plus |
