UFO06514.5prime Sequence
971 bp (154 high quality bases) assembled on 2009-08-18
> UFO06514.5prime
CAATCCACATGACTTCTATTATACCGCCGGGCTCGTTAGTTCCGCAGGCG
CAGGGCGTAGAAGCAGCCGTACCCGTATGGTTCAAGATGGACTGGAGCCC
GGAGATAGAGCAGGGCATCTACAAGGACTGGGGAACCTATTACAGTCGCC
GGCGCAGGGAGAATCTGGGCATGTACTACTTCGACAAACCCCTTATTCTT
GGACCTGCAGATTTCACGACTCTGTATCGCCAAAACCAGAACAAAGGGAA
GAATGCCCAGGCAGATGGGGCACTTAAGGACGGTTTGGAGGCAAAACGAC
TATTGAAAAACTTGCAACGCTATGATGCGCCTATTAATTTGGAGGTCTGC
GATGCATTGTACGAACTAAATCAGCTTGAGAACGCCAAAGCCGAGCTCCA
CGACAATACCCGCCTCTTTACTGGAAACAAAACTAAAATGTTCGAGCAGC
GACTGGTGGTGGTGGACGAGAACATTGAAAATGCCTGTGGCCCTTCAATG
ACTCATTACATATCGGACAAGGAGAAACTCATAGTGCACTTGAAGGAGGT
ACAGAACAAGTACAAGCCCGATACCAGGCCGCTTTGGAAAATTCTGAAGG
AACAGGAGAAATGCGATGTCCTGAGCATTCCCGAAATCGAAGAAGAAATG
CTTTCCCCCCTTGAAATTGCGAGGCGAAGTCGTGCTTTCGACGTGTTTAA
CCATATGTTCATAGATAGGTCTTGACATGATGTCATATTTCTCAGGCACG
TTCAAAAAAATCCAAACCTTCTCTTGAATCAGTGTAAGAACTCCACTGAG
TACTTACAAACGCTTTCTACAAGAAATATGACGAGATCAAAAGCTTTCTG
ATAATTCTGGAAGCCCGTATCCTCATGTACATATCGGATACCAAAGTTCA
CAACATGAAGTTGATGGATAGTTTCGCAGTATATCTTTTTCGAGTCGTAC
TAACAGACTAATCATGATTCC
UFO06514.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7634-RA | 1892 | CG7634-RA | 95..1038 | 9..945 | 4230 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21565520..21565809 | 9..298 | 1330 | 97.2 | Plus |
3L | 28110227 | 3L | 21566087..21566268 | 461..642 | 865 | 98.4 | Plus |
3L | 28110227 | 3L | 21565867..21566032 | 298..463 | 830 | 100 | Plus |
3L | 28110227 | 3L | 21566326..21566441 | 642..757 | 520 | 96.6 | Plus |
3L | 28110227 | 3L | 21566506..21566599 | 758..850 | 420 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:05 has no hits.
UFO06514.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:46 Download gff for
UFO06514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7634-RA | 88..1055 | 1..958 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:54 Download gff for
UFO06514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7634-RA | 88..1055 | 1..958 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:18 Download gff for
UFO06514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7634-RA | 88..1055 | 1..958 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:18 Download gff for
UFO06514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21565513..21565808 | 1..297 | 95 | -> | Plus |
3L | 21565867..21566030 | 298..461 | 100 | -> | Plus |
3L | 21566088..21566267 | 462..641 | 98 | -> | Plus |
3L | 21566326..21566441 | 642..757 | 96 | -> | Plus |
3L | 21566506..21566599 | 758..850 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:54 Download gff for
UFO06514.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21558613..21558908 | 1..297 | 95 | -> | Plus |
arm_3L | 21558967..21559130 | 298..461 | 100 | -> | Plus |
arm_3L | 21559188..21559367 | 462..641 | 98 | -> | Plus |
arm_3L | 21559426..21559541 | 642..757 | 96 | -> | Plus |
arm_3L | 21559606..21559699 | 758..850 | 98 | -> | Plus |