Clone UFO06514 Report

Search the DGRC for UFO06514

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:65
Well:14
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG7634-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06514.5prime Sequence

971 bp (154 high quality bases) assembled on 2009-08-18

> UFO06514.5prime
CAATCCACATGACTTCTATTATACCGCCGGGCTCGTTAGTTCCGCAGGCG
CAGGGCGTAGAAGCAGCCGTACCCGTATGGTTCAAGATGGACTGGAGCCC
GGAGATAGAGCAGGGCATCTACAAGGACTGGGGAACCTATTACAGTCGCC
GGCGCAGGGAGAATCTGGGCATGTACTACTTCGACAAACCCCTTATTCTT
GGACCTGCAGATTTCACGACTCTGTATCGCCAAAACCAGAACAAAGGGAA
GAATGCCCAGGCAGATGGGGCACTTAAGGACGGTTTGGAGGCAAAACGAC
TATTGAAAAACTTGCAACGCTATGATGCGCCTATTAATTTGGAGGTCTGC
GATGCATTGTACGAACTAAATCAGCTTGAGAACGCCAAAGCCGAGCTCCA
CGACAATACCCGCCTCTTTACTGGAAACAAAACTAAAATGTTCGAGCAGC
GACTGGTGGTGGTGGACGAGAACATTGAAAATGCCTGTGGCCCTTCAATG
ACTCATTACATATCGGACAAGGAGAAACTCATAGTGCACTTGAAGGAGGT
ACAGAACAAGTACAAGCCCGATACCAGGCCGCTTTGGAAAATTCTGAAGG
AACAGGAGAAATGCGATGTCCTGAGCATTCCCGAAATCGAAGAAGAAATG
CTTTCCCCCCTTGAAATTGCGAGGCGAAGTCGTGCTTTCGACGTGTTTAA
CCATATGTTCATAGATAGGTCTTGACATGATGTCATATTTCTCAGGCACG
TTCAAAAAAATCCAAACCTTCTCTTGAATCAGTGTAAGAACTCCACTGAG
TACTTACAAACGCTTTCTACAAGAAATATGACGAGATCAAAAGCTTTCTG
ATAATTCTGGAAGCCCGTATCCTCATGTACATATCGGATACCAAAGTTCA
CAACATGAAGTTGATGGATAGTTTCGCAGTATATCTTTTTCGAGTCGTAC
TAACAGACTAATCATGATTCC

UFO06514.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-RA 1892 CG7634-RA 95..1038 9..945 4230 97 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21565520..21565809 9..298 1330 97.2 Plus
3L 28110227 3L 21566087..21566268 461..642 865 98.4 Plus
3L 28110227 3L 21565867..21566032 298..463 830 100 Plus
3L 28110227 3L 21566326..21566441 642..757 520 96.6 Plus
3L 28110227 3L 21566506..21566599 758..850 420 98.9 Plus
Blast to na_te.dros performed on 2014-11-28 20:02:05 has no hits.

UFO06514.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:46 Download gff for UFO06514.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 88..1055 1..958 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:54 Download gff for UFO06514.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 88..1055 1..958 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:18 Download gff for UFO06514.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 88..1055 1..958 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:18 Download gff for UFO06514.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21565513..21565808 1..297 95 -> Plus
3L 21565867..21566030 298..461 100 -> Plus
3L 21566088..21566267 462..641 98 -> Plus
3L 21566326..21566441 642..757 96 -> Plus
3L 21566506..21566599 758..850 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:54 Download gff for UFO06514.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21558613..21558908 1..297 95 -> Plus
arm_3L 21558967..21559130 298..461 100 -> Plus
arm_3L 21559188..21559367 462..641 98 -> Plus
arm_3L 21559426..21559541 642..757 96 -> Plus
arm_3L 21559606..21559699 758..850 98 -> Plus