UFO06516.5prime Sequence
1123 bp (1016 high quality bases) assembled on 2009-08-18
> UFO06516.5prime
CAGTCGACATGGAGTTGGAACAAAACTTGACCGCCGCCCTGATGCAGTCG
TCGGCGGAGGAGGGCAAGTCGGAGGAGGCGTGGCCGGCGGACGCCCACCT
GCATCAGCCGGCCGAGGCGAATCAGCTCCTGCTGCCGGAGCGCTCCAGCT
GCCTGGCGGTGAAGACGTTTTTGCGCATGTGCAACCTACCATTTACGGAG
CACATCAGCGACAATGCAGAGTTTATGTCACCAGGTGGCCGGTTGACCCA
CCTGCCGCTGCTCCGTTTGGGCCCTGTCAAGACTTTTGCGGAATTCGAGC
CAATAGTGGCCCAAGTGGAGGCCGTGCAAGGCGGCAATTGCCTGGACAGT
TGGATGTCCGAGGATCAGCGCGATAACATCCGCTGTCTGGTTAGCTATGT
GGAGAATGTCTTCACCCTGGCGGAGATTCACATGAGTTTTGTGGATGAGG
TAAACTATCAACTTTACACGGCAACGCGCTGTGCAGCCGCTCATCCGTGG
CCGTTGAGTACGATTCGCCGGTTTGCCAAGCAGAAGGACGCACAGAAGAT
ACTGAAGGTCTACCGGTGGCAGGATTTGGACAACGACCAGGTAATCCAGG
AGGTGAGCATCTGTGCCGATGCGTTGATCGCTGAACTGGAGGAGGACCAG
GCGAAGAGCTATTTCGGCGGCTCACGACCTTGCAAATTGGACGCCCTGGT
CTTTGGCCATGTGGTAGCCATAATGACCACCAAGCTTCCCAACATGGAAC
TGGCCGCGGTTCTGGCCACATATCCACGTCTATTGGCCCACTGTCGCCGC
ATCGATCAGAGCCTGTTTGATGGCAAACTCCTGACCAGCGCGGTGGAGGA
GCAGGAGGACGAGATGGAGTTGGAAAAATAGAAGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATATCATATCACACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCCCCAATAAAAAACGCCCGGCGGCAACGAGCGTCTGAACAATCCGA
ATGGAGTTCTGAGTCATACTGAATCTATCAAAGGAGTCAGCGAGCTCGAT
TTCAATAGCCGGCCTGCAGCATT
UFO06516.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5662-RB | 1082 | CG5662-RB | 70..946 | 8..883 | 4330 | 99.7 | Plus |
| CG5662-RA | 992 | CG5662-RA | 70..946 | 8..883 | 4330 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15210455..15211325 | 8..878 | 4325 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:22:23 has no hits.
UFO06516.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:44 Download gff for
UFO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5662-RA | 58..939 | 8..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:31 Download gff for
UFO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5662-RA | 58..939 | 8..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:14 Download gff for
UFO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5662-RA | 70..951 | 8..888 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:14 Download gff for
UFO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15210455..15211336 | 8..888 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:31 Download gff for
UFO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15104488..15105369 | 8..888 | 99 | == | Plus |
