UFO06517.5prime Sequence
1133 bp (1029 high quality bases) assembled on 2009-08-18
> UFO06517.5prime
CAGTCGACATGCCTAACGACGCGATAATCTATTCTGGTCCCTACGAATTG
GGACGCCTTCGCCGGCGTCGTGATATGCGGGTGGCGGAGTACCTCTACAG
GCGTTCCATTCGCACACGCAATGCGGATCCCGAGATGACCGTGTGCCGTT
TTATCAAACTGCTGCTCTACTTCATCGGATTCTTTTTCGTTCTAGGCGTA
TTCACAACCGGATTGGCCCTCGTGATGATTGCGAATCATATATATCCGGA
TAGGCCGGGATGCAAAAAGTTCCCCGGACTAGCAACCGCGCCCGGACACC
ATGTCGGCGATCAGAAGCAAATTATGTGGAGCCCTAATAACATTAAGGAT
GTGGCTAACATACAACGCGCGATAATGCGAACGGTGAAACGATACGGTCT
CGAAGGCCCGAAGCGCCTGATGGGCTGTAACATAGACGACAGTTGGGGCT
ATATGTCCGGCACGCCGTGCATTCTAATAAAGATCACCCAGGCATTGGGC
TTCCAGGCGGTAACCTACGATGACGCCCTAACGCTGCCCGAGTACGCTCC
GGATGAGCTATTCGACTATGTGGTGGGCCTGGGCTCGGAGGAGCGCTTCA
ACCGCATCTGGGTGTCCTGCCAGGTTATTGAGCCAAGAGTGGACATTCAG
TTCGACTACCATCCGGTTCGCTTCTTCGATGCCGAAGAGCTCTTCACCTC
CGGCAATGTCTTTCTCAACGAGTCTTCGGACGACGACGGACCTACTTACA
AGGAGGATCCCCGCCTCAGGCGCATCATCAGTGTTCGGTTGAGCAACATT
CCGATCAACGAGGACATCCAAATCCACTGCAAGGCGTGGGCTAAGAACAT
ACCGCTCCATATGGTAACGGTCAAGATGCTGGTGCGTCTGACGGCACCAG
TTCATCCAACCACTCCATTGGTGCTGGACGAGTGTACGAGGCAAGCTTTC
TAGACCATTCGTTTGGCGCCGCGGGCCCAGGTAGTGGTCATATCATATCA
TATCATAATCATATCACCACCTAGCCTAAGGAGATCCTGGTCATGACTAG
TGCCTGGATTCTCACCAATTAAAAACGTCGCGGCACGGAGCGTCTGACAA
TTCGATGGAGTCTGAGTCATACTGGATCTCACG
UFO06517.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5250-RA | 1060 | CG5250-RA | 49..982 | 8..940 | 4570 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19228302..19229228 | 934..8 | 4560 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:58 has no hits.
UFO06517.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:43 Download gff for
UFO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5250-RA | 44..982 | 1..940 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:55:16 Download gff for
UFO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5250-RA | 44..982 | 1..940 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:46 Download gff for
UFO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5250-RA | 44..982 | 1..940 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:46 Download gff for
UFO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19228302..19229232 | 1..934 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:55:16 Download gff for
UFO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15054024..15054954 | 1..934 | 99 | | Minus |
