UFO06551.5prime Sequence
1117 bp (1010 high quality bases) assembled on 2009-08-18
> UFO06551.5prime
CAGTCGACATGGAGCCCGCCTCAAAAAAATCGAAAATGGGTAAAAACGTG
AAGTTTAACAACAACAAGAAGAAGTATTTCCACGCCAAGAGGCAGACGCT
CCAACCTGGGCAACGTGGATTCTTCGCCACGTGCAACATCAACGAGAAGG
CATGTGTTCGCGAATGCTACAATTTGTTGAACCACTATGCTGACATACTT
TACGGTTCGGAAAAGCCAGAGAATGAACCGGAAAAGAAGCAGCCAGAGGA
AGGAGCGGGTGGTGATGCGGGAGAGGATGATCCGAAGCCAGCGGCGGGAG
GCACCAGTGATGACGATGACGACTTGGAAGCAGCTGCCGCCAAATGCCGC
GAGATGCTTTCGCAGCGCAAGATGCGATTCCAGAATGTAGACACCAACAC
CACCAACTGCGTGTTCATCCGCACCCAACTGGAGGATCCGGTCGCCCTGG
GTAAACACATCATCAACGACATAGCGACCACCGGCAAGTCCATGTCCCGA
TTTGTCCTGCGCCTGGTGCCCATCGAAGTCGTCTGCCGCGCCAACATGCC
GGACATCATCACTGCCGCCGGCGAGCTCTTCGACAAGCACTTCCTCAAGG
AGCCCACCAGCTATGGCATCATCTTCAATCATCGCTATAATCAGCAGATC
AAGCGCGACCAAATCATAACCCAACTGGCCGAGCTGGTCAACTCCAAGAA
CGTGGGTAACAAGGTGGACCTAAAGGAGGCCAAGAAATCCATCATCGTGG
AGGTCTTGAGGGGCTGGTGTCTGCTTAGCGTGATCGACAACTATCTGGAG
TGCAAAAAGTTCAACCTGGCCGAGCTGGCCAATCCTAGCGATAAAAATCT
TCCGGCGAACGAGATTCCAAGTCGGAGACTTCAGAGGTCGCCAATGGCAA
CGATAAGAGCAAGCTGATCTTCAGAGAGTCCAAGTCTATGACGATGAGAT
ACGACTCTACTGAGATGACAAGCAGCTTTCTAGACATCGTTTGGCGCGCG
GGCCCAGGTAGTGTCATATCATATCATATCATATCATAATCACACTAGCT
AGAGATCTGTCATGACTGTGGCTTGATTCCACAATAAAACGCCCGCGGAA
CCGACGTCGACATTCCG
UFO06551.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15014-RA | 1155 | CG15014-RA | 62..1033 | 8..971 | 4630 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4321252..4322198 | 949..8 | 4470 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:27:25 has no hits.
UFO06551.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:32:00 Download gff for
UFO06551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15014-RA | 33..1004 | 8..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:30 Download gff for
UFO06551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15014-RA | 62..1033 | 8..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:52 Download gff for
UFO06551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15014-RA | 62..1033 | 8..971 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:52 Download gff for
UFO06551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4321227..4322198 | 8..971 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:30 Download gff for
UFO06551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4321227..4322198 | 8..971 | 98 | | Minus |
