UFO06561.5prime Sequence
1066 bp (974 high quality bases) assembled on 2009-08-18
> UFO06561.5prime
CAGTCGACATGAGGCTGCTGTTGGTTTTAAGCCTGGCCATATTGGTTGCC
TTCGTAACGGGTGCTGATGACACTGACGATGACTATTACGATTATTACGA
CTATGGTGATGACTACTATGACGACTCTGATGTAGAGTCCAGTTCGGAAA
GTGGTGTTGGTGCATCCAGTAGCTCAGAAGATGATGCTAGTACCTCCGAG
GACAGTTCCTCCGGCGAAGCTTCCGATACAGGTAGTTCTTCAGAAACTTC
TGGAGATGGTTCCTCCGCCGAAACGACCTCCAGTTCAACTCCAACCAAGG
CAGAAAAAGCCAAGAAAACTGCTGCACGCAGAGCTAGACGGCGCAGGCGC
ACCACCACCGCTGCTCCCAAACGCAAAGTAGCGGCAGCCGCGTCTGCCAA
GAAGCAAACACCTGTTGCCCAAAAGAAGAAGACACCTGTGGCAGCCAAGA
AGAAGGCGAATACTGCCGCCAACAAACGCAAACGCACAGGCGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTGCCCATGGTGAAACGGGGGCGAGAGTTGTCCATATTGC
CACGTTTAAATCAAACTGGTGAACTCACCAGGATGCTGAACGAAAACATA
TCTCAATAACCCTTTAGGAATAGCAGTTTCACGTACACGCCCATCCTGCG
AATATATGTGTAGAACTGCGAATCGTCTGCATCACTCCGAGCGAGTAAAC
GTCCAGTTGGCTATGA
UFO06561.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9040-RA | 749 | CG9040-RA | 65..547 | 9..491 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13987942..13988424 | 9..491 | 2415 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:11:25 has no hits.
UFO06561.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:53 Download gff for
UFO06561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9040-RA | 44..536 | 9..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:05 Download gff for
UFO06561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9040-RA | 65..557 | 9..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:28 Download gff for
UFO06561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9040-RA | 65..557 | 9..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:28 Download gff for
UFO06561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13987942..13988424 | 9..491 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:05 Download gff for
UFO06561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13981042..13981524 | 9..491 | 100 | == | Plus |
