UFO06565.5prime Sequence
1083 bp (984 high quality bases) assembled on 2009-08-18
> UFO06565.5prime
CAGTCGACATGGGCGTTCGTGTGATAGAAACCGATTCGGCGAGCGATTCG
TATGACGATGACGAGTGCTCCACTTGCCAGAAAGAGCACGAGCAGGGTAA
ATCCCCCAATAAGAGCAAGAAAAGTTCCACGCCGCCGGAGACAACCATCT
ACGCCAGCAAGGATCTGGTGGGCAACTGCAAGGAGTACCGCATTGAGAAC
AACACGCGCGATCTCAGGATCATCGGCAATGGCAACCGCATACGTATTGT
GAACAACTCCGGGCAACTGCAAGTAATCGGCAATAGCACCCGACTCAAGA
TTCAGAACAATAGCGGAGCCCTCAAGTACACGGGTAACGACGGTAGGATC
TACCTGGGCAGCAGCTCCACGCAGCAGGTGGTCGACTACACGGGCTGCAA
TGGACTGCTCAAGGTGGTCAAGTCCCTGGATCTTAGCGGCGATGCCAAGA
AAAGGCCCAGCTCTCGATCGAAAAACGCCAAGCCAACGCCAACGGATGCT
GGCCAAGGCAAGTCCGGCGGCATTGAGATCGACAGCAATCTAACGATACG
GCACGGAGCCGGGAACATTGTGATCAAGAATGCCATCAACGTGAGCATCG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAG
CCATCACAAACGGCATGATGACCTGATCGCAGCGCATCAGCACTTGTCGC
TTGCGTATATATTTGCCATGTGAAACGGGGCGAGAGTGTCATATGCCACG
TTTAATCAAACTGTGACTCACCAGGAATGGCTGAAACGAAAACAATCTCA
ATAATCGTAACAATTGGCAAGGTTCACGGTACG
UFO06565.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pirk-RB | 1846 | CG15678-RB | 896..1486 | 9..599 | 2895 | 99.3 | Plus |
| pirk-RA | 1301 | CG15678-RA | 351..941 | 9..599 | 2895 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21661327..21661917 | 599..9 | 2895 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:45:34 has no hits.
UFO06565.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:52 Download gff for
UFO06565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15678-RA | 321..928 | 1..607 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:18 Download gff for
UFO06565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 344..951 | 1..607 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:11 Download gff for
UFO06565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pirk-RA | 344..951 | 1..607 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:11 Download gff for
UFO06565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21661317..21661924 | 1..607 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:18 Download gff for
UFO06565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17548822..17549429 | 1..607 | 98 | | Minus |
