UFO06569.5prime Sequence
603 bp (128 high quality bases) assembled on 2009-08-18
> UFO06569.5prime
CAATCCACATGGAAACTCCCCCCACTCCCGCCACGACCACACCGCCATCA
TTGACAACTGAGGGCACCATGGACGACATCCAATACCTGCTGCACCTGGA
GGCGATGCGCCGTTTTCAGGAAGACAGCCGCAATGTAAAGCGCCAGGTGG
AGGAGCAAGTACGCATTTGGCTGGACGCCAAGTGTGAGTATCATCGGGAC
TTTGGGCGGCTGGCGAGGCTCCTGAAGTGCGAAGCCCTGCAGGCGGCCGT
GGATGCCCATCGTGTATCTGATGAGAATCAAGTCGACCAGGCGGCCAAGG
ATATCGCTAGTTTGCGATCCAAACTGGGCGGGGATCTGCGTCCCGCCATT
CTGGACTCCAACGATGTGAAGCAGGGCCTGGAACATCTGAACACCACCCA
CAGACCGCGCCTAAATCTATGCCGGGAACGACGGGAGTTCACCCAGAACC
AAGAAACTCTAAAAAGTTTGCGTACCGCCGTCGATGGATTGGAGAATGGT
ATGGAGATGGGCATGATACAGGCAATGGACCGCCTTGTGGAGGATCTTCT
CCCCCCGCGGGAAACATCCTCCGCAAGCTTTCTAAACCGTTCATTAGGCG
CGC
UFO06569.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dgt4-RC | 986 | CG4865-RC | 344..901 | 9..566 | 2565 | 97.3 | Plus |
| dgt4-RB | 1101 | CG4865-RB | 400..957 | 9..566 | 2565 | 97.3 | Plus |
| dgt4-RA | 729 | CG4865-RA | 87..644 | 9..566 | 2565 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4114228..4114785 | 9..566 | 2565 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:36:39 has no hits.
UFO06569.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:48 Download gff for
UFO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt4-RA | 61..627 | 1..566 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:10 Download gff for
UFO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt4-RA | 78..644 | 1..566 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:33 Download gff for
UFO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt4-RA | 78..644 | 1..566 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:33 Download gff for
UFO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4114219..4114797 | 1..573 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:10 Download gff for
UFO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4008252..4008830 | 1..573 | 95 | -> | Plus |
