UFO06572.5prime Sequence
1114 bp (-60 high quality bases) assembled on 2009-08-18
> UFO06572.5prime
TGCGGGCGCATATTTTCTTATAATATACTTTATACAAATTTATCACTCGA
CGTGCGCTTCCATATGGATCGCCAGAAAATTTGCTCGGATCTGGAGAGCT
CCGATCGACGTCTGAAAACCACAGTTCTGGATGAACTGCTCGATAAGTGC
AAAGAAGCAACAAATTCCGAGAGTGCTGACAAAATAGCCGATGTTTTCGA
TAAACTGTATCTGCATCTACTGAAATGCTACGAAGATAGATTCGAAAGCG
TTCGCTCTAAAGCCATTCAAGTGGTAAGCGCTTTTTTGTCAAGTCTTCCG
CCCACGGATTTCCACCTGATGAATGTGGTTTCAACTTTGGCGGAGCGGAT
GGGAAAGGCCGAAACCGTGGAGCCCAGCGAGGAAATCCGTCTCCTCTACA
TTGCGCAACTGAATTTGATGATTTGCCTGTATGAGAAAATGGAAAATGTG
GGCGTCTTCAGGGAGTGCTATCCCTTGGTGGTGAAGATTCTGATTAAGTC
TATCAAGGATGACTATCCGGTGGTGCAGCGCGAAGGATGCTCCGCTGTGG
TTACTCTCTCTCGTTTGGCTGATACCCAGGAGTTTCGTCCCTTTACAGAA
TCCATTCTGCTACCTCTTTACACAATGTTGAATCACAAGCATGCACAGGC
CAGGATATCGGCCATTCAAGCCATCGCCAGGCTGAGTCTACACATGGACG
CCAGTGGCGATGCAATGAGAAGGCTCTTCAATGAGGTGTCGCCCCTACTT
ATGGACACCATGCCATTGGTTCGCCGTGAAGTCGGTCAGATGGGCATTCT
TATGCTAATGGAACTATTGGATCGCTATTCCTTCTTTGAGAGAATTCTAC
CGCTGGTTCTTTGTTGCCTAAAAGACGAATCTCCGGAGGTTCTGAACCAC
ATATACCCGCAATGGCTCAAGTGTGCATACAATATTTCAATGAAAACGAA
GCCGAGTTGTCACAACAGGAAATAGCGATTTGCCCGTTGAGAATTACCCG
AAAGATGTCAAGCGACTACGATAGGATGTCGTGATTGTGCAACGATCTTT
GCGACCTCTTGCAACTTATTACCAGAGAAACAGGCGACTGTAAGAATATG
TACCGCCTCCACGC
UFO06572.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31320-RA | 3431 | CG31320-RA | 654..1716 | 56..1114 | 4975 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14360071..14361133 | 1114..56 | 4800 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:47:43 has no hits.
UFO06572.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:31:54 Download gff for
UFO06572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 604..1653 | 53..1098 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:08 Download gff for
UFO06572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 651..1700 | 53..1098 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:37 Download gff for
UFO06572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31320-RA | 651..1700 | 53..1098 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:37 Download gff for
UFO06572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14360098..14361118 | 71..1088 | 98 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:08 Download gff for
UFO06572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10185820..10186840 | 71..1088 | 98 | == | Minus |
