UFO06585.5prime Sequence
1085 bp (1008 high quality bases) assembled on 2009-08-18
> UFO06585.5prime
CAGTCGACATGACGAAGAGCAATGGCGATGTGGAGGCGGCAGCCCAGGTG
CAATCTCTGGGCGGAAAGCCCAGCAACGGACATGGCCAGCTGAATGGGAA
TGGCTATCATCAGAACGGCGGACGCAGGGATTCCAGTCAAGCCTTCACAC
CACTGCTGTCGCAGCACAATAATGGCACCACCAATGGCGAGGTGACCACT
CCGCCTCCGAGTACAGTGCTCTACGAGAGCACCCCGAGCAATAATAACGA
GTGGAAGGCCCCGGAGGATCTGGGACACCTGAAGAATGGCCTGGGCAACA
TACTGAGCAGTAATAATAATGGCACCGGCAATGGGCACAGTCTGAGCGAA
AAGTATGCCCATGAACAGGCTCCCCTGACCGGAGGTTACAAGTTGCCACC
TCGCTCCAGTGAGTCCGAGGAATCCGATTTCGATTCCGACCTCAATGGCG
GCTCCTCCGCGGAATCCAGCTCCAGTTGCGGCCTTTTCGGCTGTCGGCCC
AGGTGGGCCAGAAGATTCGCGTCCACGCACGTCTTCATGGTGGTCTTCCT
GCTGGCCTACATCCTGCAGGGCATGTACATGACCTACTTCGTCTCTGTGA
TCACCACCATTGAGAAGCTATTCCAGATCAAGTCGAAGACCACGGGAATT
CTGCTGAGCGCCAGTGAGATGGGTCAGATATGCACGGCCATGTTGCTGAC
CTACTTCGCCGGCAGAGGACATCGTCCGAGATGGATTGCCTGCGGCATGG
TCCTGTTCTCAATCGCCGCCTTCTCCTGCGCCCTGCCGCATTTCATCTTC
GGCGAGCAGCTGATGCACTCCAGTGTAATTCTGCAGCAGACGCAGGTCTC
CCCCCCAATAATTTCCTTCTCATCACACTGGCTGATGCCAGCAGTGACAG
GTTATCCCATTTGTGCATTTTGGGTGGCACCAAACCCATTCGGGCAGCGA
GTGCACGAGGAGCGCAGCTGACAGCCTCCCACTCTAGATCACGTCATCGT
GCTGTGCATCTTCTTGCAGCTGCTCAGCTCGGCATGTCAGACGCTGCCCA
CACTGGTCCATACTTACTCGATGACAGTAGCGACA
UFO06585.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 4063 | CG7571-RE | 1006..2044 | 9..1032 | 4795 | 98.4 | Plus |
| Oatp74D-RD | 3658 | CG7571-RD | 601..1639 | 9..1032 | 4795 | 98.4 | Plus |
| Oatp74D-RC | 3715 | CG7571-RC | 658..1696 | 9..1032 | 4795 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17507897..17508915 | 9..1015 | 4480 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:33:57 has no hits.
UFO06585.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:46 Download gff for
UFO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 618..1677 | 1..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:27 Download gff for
UFO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 639..1698 | 1..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:38 Download gff for
UFO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RC | 650..1709 | 1..1042 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:38 Download gff for
UFO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17507889..17508948 | 1..1042 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:27 Download gff for
UFO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17500989..17502048 | 1..1042 | 97 | | Plus |
