UFO06591.5prime Sequence
1083 bp (977 high quality bases) assembled on 2009-08-18
> UFO06591.5prime
CAGTCGACATGCATCTGAACCTGAAATATTTCATTGGTCTGCTACTGGTG
CTGCTTTGCAGCTCTTTTGCGGTGGCCTATCCCCAGGGGCCTGGGTGTGG
TCCACCACCAAGTGGAACACCTCCGTCGGGACCGCGACCATCGGGTCCAC
CACCTGGAGGTCGCTGCGGACCACCACCATCGACCACGGCTGCATCTACC
GGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCA
GGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAAT
AGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGA
AACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTC
AGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCA
CCAGCTCACCGTCTTTCATTGCCATACGAATTCCGGATGAGCATTCATCA
GCGGGCAGATGTGAATAAGGCGGATAAACTGTGCTTATTTTTCTTTACGT
CTTAAAAGCGTATATCAGCTGACGTCTGTATAGTACATGAGCACTGACTG
AATGCTCAATGTTCTTACGATGCAATGGGAATATCACGTGTAATTCAGTG
AATTTTTTTCTCAATTAGCTCTAGCTCTGAGAT
UFO06591.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11368-RA | 361 | CG11368-RA | 29..223 | 9..203 | 960 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7452373..7452505 | 71..203 | 650 | 99.2 | Plus |
| X | 23542271 | X | 7452237..7452301 | 9..73 | 325 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:26:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 772..839 | 123 | 68.1 | Plus |
UFO06591.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:19 Download gff for
UFO06591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11368-RA | 30..231 | 9..212 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:29 Download gff for
UFO06591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11368-RA | 29..230 | 9..212 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:57 Download gff for
UFO06591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11368-RA | 29..230 | 9..212 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:57 Download gff for
UFO06591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7452237..7452299 | 9..71 | 100 | -> | Plus |
| X | 7452374..7452505 | 72..203 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:29 Download gff for
UFO06591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7346270..7346332 | 9..71 | 100 | -> | Plus |
| arm_X | 7346407..7346538 | 72..203 | 99 | == | Plus |
