UFO06594.5prime Sequence
1084 bp (998 high quality bases) assembled on 2009-08-18
> UFO06594.5prime
CAGTCGACATGAAATTCTTGATTTTCTGTCTGATTGCTCTGTTTGCCATA
GCCTCGGCGCGTCCCCAGTTCGGATTCGGCGGATTTGGTGGCGGGCTTGA
GCAGCAGCAACAGCAGGGCGGTTTTGGACAAGGATTCGGTGGTTTCGGTT
CCTTTGGACAGCAGCAACAGCAGGAAAGTTTTGGCGGAAATGGAAACTTT
GGTCAGCAGCAACAAGAGTTTGGTGGTTTCGGCGGTTTTTACGGTGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTC
ATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCAC
GTCTTTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGCGGGCAGA
TGTGAATAATGCGGATAAACCTGTGCTTATTTTTCTTTACGTCTTTAAAG
CGTATATCAGCTGACGTCTGTATAGTACATGAGCACTGACTGAATGCTCA
AATGTTCTTACGATGCCATGGAATTATCACGTGC
UFO06594.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4440-RB | 538 | CG4440-RB | 84..320 | 9..245 | 1185 | 100 | Plus |
| CG4440-RA | 384 | CG4440-RA | 84..320 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16330078..16330303 | 20..245 | 1130 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 813..880 | 123 | 68.1 | Plus |
UFO06594.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:12 Download gff for
UFO06594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4440-RA | 77..321 | 4..249 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:33 Download gff for
UFO06594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4440-RA | 79..323 | 4..249 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:45 Download gff for
UFO06594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4440-RA | 79..323 | 4..249 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:55:45 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:58:33 has no hits.
