UFO06617.5prime Sequence
1150 bp (1018 high quality bases) assembled on 2009-08-24
> UFO06617.5prime
CAGTCGACATGTTCAAGCTGTGCGTCTTCGTTGCTCTCCTTAGCCTGGCT
GCTGCTGCCCCAGCTCCCGCTCCTGCTCCTGCTCCTGCTCCTGGTCTCAT
TGGCCCTGGCATTGTGGCACCTGGAATCTGGGGACCCACCGTTGTCGGAT
CTCCTCTGCTTGCTCCTCAGGTGGTGAGCGTGGTGCCCGGTGCCATTTCT
CATGCTGCCATCACCCAGGTGCATCCTTCTCCTCTGCTGATCAAGAGCGT
CCATGGCCTGGGACCAGTTGTGATCGGTGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGC
CACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATT
CACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAA
CAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTTCATTGTCA
TACGAAATTCCGATGAGCATTCATCAAGCGGGCAGAAATGGTGAATAAAC
GGCGGATAAACCTTGTGCTTATTTTTCTTACGGCCTTAAAAGGCGTATAA
TCCACCTGAACGGGCTGGGTTATAGTACATTGAGCACTGACTGAAATGCC
TCAATGTTCTTACGATGCAATGGATATATCACGGGGAAATCCATGATTTT
UFO06617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nplp3-RA | 538 | CG13061-RA | 35..304 | 9..278 | 1350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16318198..16318456 | 20..278 | 1295 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 847..914 | 123 | 68.1 | Plus |
UFO06617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:33 Download gff for
UFO06617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nplp3-RA | 34..306 | 9..282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:45 Download gff for
UFO06617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nplp3-RA | 35..307 | 9..282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:52 Download gff for
UFO06617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nplp3-RA | 35..307 | 9..282 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:53:52 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:38:45 has no hits.
