UFO06618.5prime Sequence
1119 bp (1017 high quality bases) assembled on 2009-08-24
> UFO06618.5prime
CAGTCGACATGGTGCTCGTGGAGTGGATGGGGGGCGGGGGTGGGAGTAGG
TGGCAAGGACGGGGGGCGGGCGTCAATCGGTGCGTAGTTGAGTCGCGATT
GTTATTGTTGCTGCCCCGTTTTCTTGTCCTCCGCCTGCTGATTCCGGGGA
CTCAGATGTTTCAGATGTTTCAGATGCTCAGGTGTTCAGTTGCTCTGGTT
CTCCGGTATATTTGGAACTCGAGTCGGCTCTGCGGTCGCCGGATGATGAC
TCCCGATGACAACCGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAA
AACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGG
TGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAAC
CCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGA
ATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGA
TGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGAACACT
ATCCCATATCACAGCTCACGTCTTTCATTGCATACGAAATTCCGGATGAG
CATTCATCAGCGGGCAAGAATGTGAATAAAGGCCGATAAACTGTGCTTAT
TTTTCTTTACGTCTTTAAAGCGTATATCAGCTGACGTCTGGTATAGTACT
GAGCACTGACTGAAATGCCTCAATGTTCTTACGATGCATGGCATTATCAC
GTGATTCAGACTTTTCCAT
UFO06618.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14435-RC | 3831 | CG14435-RC | 298..555 | 266..9 | 1290 | 100 | Minus |
| CG14435-RA | 2573 | CG14435-RA | 298..555 | 266..9 | 1290 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6843367..6843624 | 9..266 | 1290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:50:35 has no hits.
UFO06618.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:32 Download gff for
UFO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14435-RA | 292..558 | 1..273 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:43 Download gff for
UFO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14435-RA | 293..559 | 1..273 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:36 Download gff for
UFO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14435-RA | 293..559 | 1..273 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:40:36 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:15:43 has no hits.
