UFO06619.5prime Sequence
1170 bp (1038 high quality bases) assembled on 2009-08-24
> UFO06619.5prime
CAGTCGACATGTGTAGTTTAGTTGCAGTTTCGATTCACATCGGATTGCCT
TGCCCAGGCAGCACATCAATCATCCATCACGCACCAAAGGCCGGGAGACA
ACGACCCAAAACGGGCAGTGCAAACCTGAATGGCAAACGGCCCATGCCAC
GCATGCGATTTATACGTGTCCAAGGTTCACTCTGGATCGCAATGGATGCA
ATTTGGCCACTTCACTGCACATTTGACCGGATTAAAATTCCTTTCAAATG
GCTATATGCTACTAAGCTCTTTGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
ATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATC
TTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCC
AGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGG
TGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAA
TTCCGGATGAGCATTCATCAGCGGGCAAGAATGGTGAATAAGGCCGGATA
AAACTTGTGCTTATTTTTCTTTACGGCTTAAAAGGCGTAATATCAGCTGA
ACGTCTGGTTATAGTACATTGAGCACTGACTGAATGCCTCAATGTTCTTT
ACATGCATGGATATCACGTGTATTCAGGATTTTTTCCATTTACTCTAGTC
TGAGATCTAACTCGAAGCTA
UFO06619.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 544 | CG32102-RA | 192..456 | 8..272 | 1325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12469160..12469424 | 272..8 | 1325 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:50:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 841..908 | 123 | 68.1 | Plus |
UFO06619.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:31 Download gff for
UFO06619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 187..462 | 1..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:39 Download gff for
UFO06619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 187..462 | 1..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:32 Download gff for
UFO06619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 187..462 | 1..280 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:40:32 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:15:39 has no hits.
