UFO06626.5prime Sequence
1069 bp (974 high quality bases) assembled on 2009-08-24
> UFO06626.5prime
CAGTCGACATGCGTTCCCTATTCCTGGTCTGTTTGGTCTTCTGCTCCGCT
TGGTCCTTGCCAGAATCGGACCTCTTACCCACATCTCCAGCACCCGGAAA
CGACACCGCCGAGGAGCCTCAGCTGCCCGCCTTCTCGCCATTTAGTCTGC
GCGATGGCAGGTTCGCCATAGGTGCCTTTGCCAAAGTGAACTGGTTCCAA
GCTCAGGCCACCTGTGCCGCCTATGGGTACACGCTCGTAAGCATTACATC
CGAGCAGGATCAGCGCAGTCTCCGCAACTTCCTCTTCAACTACGCCCGGA
ACCAGCAGGATCTGCTGACCGATCCGCTCTGGACCTCGGGCACCGACCTG
GCCAGTGACAACAACTGGGTGTGGTTCAGCAAGGGGCGCGCCGTCAACTA
CCGCAACTTCCAGAACGGTCTACCGGGCTACTCCAGCGATAATCGCCACT
GCCTTGGCATCAATGGAATTAACGGACTATGGGTGAACGAGAACTGCTCA
GAGCTGCGCTACTTCGTTTGCGAGAAGCGTTGCCAGTTCGATGACGACGT
AAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCA
CCTGTCGCCTGCGTATATATTTGCCCATGTGAAACGGGGGCGAAGAAGTG
TCATATGCCACGTTTAATCAAACTGTGAACTCACCCAAGATGCTGAAACG
AAAACATATCTCATATCGTAAGAATAGCAGTTTCACGTACCGCCACTGCA
ATATTGGTGAACTGCGATC
UFO06626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8343-RA | 631 | CG8343-RA | 11..558 | 7..554 | 2740 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6179736..6180283 | 7..554 | 2740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:00 has no hits.
UFO06626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:28 Download gff for
UFO06626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8343-RA | 10..570 | 1..561 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:50 Download gff for
UFO06626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8343-RA | 4..564 | 1..561 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:03 Download gff for
UFO06626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8343-RA | 4..564 | 1..561 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:03 Download gff for
UFO06626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6179729..6180289 | 1..561 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:50 Download gff for
UFO06626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2067234..2067794 | 1..561 | 98 | == | Plus |
