UFO06641.5prime Sequence
1161 bp (1033 high quality bases) assembled on 2009-08-24
> UFO06641.5prime
CAGTCGACATGAAGTTCTACCTGGGATTGGCGGCAGTAGTAGTTGCGATG
GTTTCCCTAGCGAAGCCGGGAGAAGCCACCTTTGGCAAGCTTAATCTTCT
TCTGGGCGGAGCCACTACGTCTGGCTATGGATCTGGATATGGCGGCGGCT
ATGGTTCTGGCTACGGCTATGGATCTGGCTATGGATCAGGATATGGCGCC
GGCTATGGATACGCTCCCGAGAACGTGGTGAAGGTGATCAAGGTATCGGT
GGTGCCAGGAGGTGGAATCGGAGGAGGATATGGCGGAAGCTATGGTGGAG
GATATGGCGGCGGTTACACTGGCGGCTATGGCGGTGGCTATTCCAGCGGC
TTTGTGGGCGCTGCGCCTGCCATATCCACCTCCGCCGTGGTTACACCGGT
GGTCACATCGGTGTCCACCCCGGTTGCCACTCCTGTCCTGGCCGGTGGAG
CCGGCTATGTTGGCGGATTCGGAGGCGCTTTGGGCGGAAGATTGGGTGGC
TATGGAAGCTCCTTCGGCGGTGGTGCTGCCCTTCCCGCCTCCTACGGCTA
TGGCGCTGGCTATGGCGCTGGCGGCGGCTTTGGACTGGGATTCGGTGCAC
CACCACCACCACTTGGCTTGGCTGGAGGACTCTGCGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGTATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTGTCCCCTTGCGTATAA
TATTTGGCCCATGGTGAAACCGGGGGGCGAAGAAATTGTCATATTGGCCA
CGTTTAATCAACTGGGTGAAACTCCCCAGGGATTGGCTGAACGAAAAAAC
ATATTCTCAATAACCTTAGGGAAATAGCCAGCTTCACCGTAACGCATTGC
AATATTGGTAA
UFO06641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5070-RA | 814 | CG5070-RA | 83..710 | 8..635 | 3125 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17203194..17203821 | 8..635 | 3125 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:24 has no hits.
UFO06641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:22 Download gff for
UFO06641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5070-RA | 75..711 | 1..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:16 Download gff for
UFO06641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5070-RA | 77..710 | 1..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:19 Download gff for
UFO06641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5070-RA | 77..710 | 1..635 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:19 Download gff for
UFO06641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17203188..17203821 | 1..635 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:16 Download gff for
UFO06641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17097221..17097854 | 1..635 | 99 | == | Plus |
