UFO06645.5prime Sequence
1117 bp (1007 high quality bases) assembled on 2009-08-24
> UFO06645.5prime
CAGTCGACATGATGCGCAGCCTTTGTGCCCTCCGTGGACAATGCCAGCAA
CTGTTCAGGAGCTCCATCCGCCCTCAAAACTCAGTCCATAAGTCACAACA
ATTTTGGCGCATGAAATCGACGGATTCTCCGGAGGATGCCGCCCGTAAAT
TGCGTGCGAAATCCACACTCTACTACATAACCGCCGGCGGTGTGCTGATT
GTGGGCCTGAGCTATGCTGCTGTGCCGCTGTACAGCATCTTCTGCCAGGC
CTACAGTTACGGAGGGACCACCACGCAGGGGCACGATGCCGAAAAGGTGG
AGCACATGAAAAAGATCGAGGATCGGGTGCTGAAGATCCGTTTCAACGCC
GACATTGGATCCTCGATGCGCTGGAACTTCAAGCCGCAGCAGTACGAGAT
CAAAGTAGCTCCTGGCGAGACTGCTCTGGCCTTTTACACGGCGCGAAATC
CCACGGATAAGCCGGTAATTGGCATCAGCACGTACAATGTGATTCCCTTC
GAGGCGGGCGCGTATTTCAACAAAATCCAATGCTTTTGCTTCGAGGAACA
GCAACTGAATCCACACGAGGAGGTGGACATGCCCGTCTTCTTCTACATCG
ATCCCGAAATAACGGCAGATCCGGCGCTGGAGACCTGTGACACCATCACC
CTTTCGTACACCTTCTTCGAGGCCAAGGAGGGTCTGAAACTGAACTTCCC
CAGCTATGCAAAACCTCATGCGGCAAGTGCGGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCTGCCACTCATCGCAGTACTGTTGT
ATTCATTAAGCATTCTGGCGACATGGAGCATCCAAACGGCATGATGAACT
GGATCGCCAGCGGCCATCCAGCACTTGTTCGCCTGGCGTAATATTGCCAT
GGTGGAACGGGGCGAGA
UFO06645.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31648-RA | 898 | CG31648-RA | 119..841 | 9..731 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5527075..5527797 | 9..731 | 3615 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:05:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| diver | 6112 | diver Tinker 6112bp | 4954..4993 | 365..403 | 116 | 80 | Plus |
UFO06645.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:20 Download gff for
UFO06645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31648-RA | 113..838 | 9..734 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:11 Download gff for
UFO06645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31648-RA | 119..846 | 9..736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:14 Download gff for
UFO06645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31648-RA | 119..846 | 9..736 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:14 Download gff for
UFO06645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5527075..5527796 | 9..730 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:11 Download gff for
UFO06645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5527075..5527796 | 9..730 | 100 | -> | Plus |
