UFO06648.5prime Sequence
331 bp (12 high quality bases) assembled on 2009-08-24
> UFO06648.5prime
CAATCCACATGAAATTCGCCTGCGCTACGGTTCTGCTCTTGGCCACCATT
CTTGGGGCCCAAGCTGTGGACTGGAATTCGGTCAAGAACCTGAACATCGA
TACCCCGATGCCCAAGGTCCATGGCGAGACCCTGCCCAGCGGTAGGATTA
CCGGAGGACAGATTGCCAAACCCAACCTATTCCCCTACCATTTGGGACTA
CTGCTGTACATCACTGGAGGAGCTGCCTGGAGCAGAAGCACCATCATCAG
TGACCGCTGGATCATCACCGCCACCCATTGCACGGACAGCCTGACCACCG
GAGTGGATGTCTACCTGGGCGCCCACGATCG
UFO06648.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10472-RA | 936 | CG10472-RA | 18..340 | 9..331 | 1420 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6062571..6062893 | 331..9 | 1420 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:43 has no hits.
UFO06648.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:25 Download gff for
UFO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10472-RA | 6..336 | 1..331 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:02 Download gff for
UFO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10472-RA | 10..340 | 1..331 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:24 Download gff for
UFO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10472-RA | 10..340 | 1..331 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:24 Download gff for
UFO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6062571..6062897 | 1..331 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:02 Download gff for
UFO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6055671..6055997 | 1..331 | 94 | | Minus |
