UFO06651.5prime Sequence
1070 bp (998 high quality bases) assembled on 2009-08-24
> UFO06651.5prime
CAGTCGACATGCCCGACTTCTATGAACTCTTGAATGTGCCATCCACGGCC
AGTTTCGATGAGATCAAGTGCAGCTACAAACAATTGATACTACAATGTCA
TCCCGACAAATTGCGACAGCTCGATGACCCAAATCCGGGATCGGAGGCCC
AGAACAGTGACTTCAATGCGATAAACGCGGCGTGGAACACGCTGAAAGAT
CCCATTAGGCGCAAGCACTACGACGCAGAACTGCTGCAGTCGAAATTCCG
GGCGCATAGCAACATCTACGCCACCGTTGTGTTGAGTGAAATGCAGCGGA
TCCAAGTGGAAATCGAAGAAGATGACGACGAGGCACCGGCACCTTCAGCT
CCACCTCCCTGCCAAGCATCTGAATCAGAATCAGAATCCGAGGCGAACAA
AGGGCCGGCGACAATGTGGAGCTACGCGTACGACTGCCGATGCGGCGGTC
AGTATCTGTTCGATGGACCCGCAGACGATGATGAGTCACCCGAAGTGATT
GTGGAGTGCAACGAGTGCTCTTTAGTGATTATTGTGAAACAAGCCGCAAG
TTGTAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCAGCGGCATCA
GCACTTGTCGCTTGCGTATATATTTGCCATGTGAAACGGGGCGAGAGTGT
CATATGCACGTTTAATCAACTGTGAACTCACCAGGATGCTGAACGAAAAC
ATATCTCATTATCGTTAGATAGCCAGTTTCACGTACCGCCCAATCTGCAT
TATGGTGAACTGCGAGCGCT
UFO06651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2911-RA | 974 | CG2911-RA | 403..953 | 7..557 | 2740 | 99.8 | Plus |
| CG2911-RB | 921 | CG2911-RB | 352..900 | 9..557 | 2730 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5622140..5622688 | 557..9 | 2730 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:37:15 has no hits.
UFO06651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:15 Download gff for
UFO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2911-RA | 397..958 | 1..562 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:33 Download gff for
UFO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2911-RA | 397..958 | 1..562 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:19 Download gff for
UFO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2911-RA | 397..958 | 1..562 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:19 Download gff for
UFO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5622135..5622693 | 4..562 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:33 Download gff for
UFO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1447857..1448415 | 4..562 | 99 | | Minus |
