UFO06654.5prime Sequence
1092 bp (997 high quality bases) assembled on 2009-08-24
> UFO06654.5prime
CAGTCGACATGGACTGGTACGTGGGCACAGAGTGGGAGGACAAGAACCGT
GGTCTGGCCAAGAAGGTAATTGGCCTCCAATTCACCGAAATGGACAAGCC
CACGATAATCAGTACGGTGGAATTCAGTGTCAACAAGAAAGCCACCAACT
TGGGAGGACGACCTAGCAAATATTTGGTCAGCGATGAGTCCGCTACGTAT
CCTCAAAAGCACAGCCTGGAAATGGGCACCAGCCTGACCGCAGTGGACTG
CTACTTGGAGCTGCTGCTGCAGCAATTTGTGCCGGGTGAAACGGCAGCCT
GTAGCATCACGACAAAAACCGGCGAACGAATAGAATTTGAACTGAAGCTG
GAGAAAATTGTGAAGAACACTCAGGTGGAGAAGCTAAGCGCTGCAGAGAT
CTATGAGGTGGCACTACGTCTCAAGGAAAGCGGCGTGGCCACCTTTAAGA
CGTTCCCGAAATTCGCCTTTGATTACTTTGTGCGTGCCGCAAAGTTGCTG
ATCACCTACAAACCCTTCGATAAACTGACCAAAAAGACCAATGGCATCAA
CGGCCAGGCGGTGGAGGAGCTCTTTATTCAGATACAGACCAACCTGGCCG
CCTGTTTGCTGCAGGAGAACGCTATGAGCATGTAATCTACCACACGCAGT
TTGTGGAGACGGAGGAGAGTCCCAGCGAGAAGAGCATCTACCGGCGTGCA
CTCGCCTACTATCACCTGAAGGAGTTCGCCAAGGCGCAAGCCACCATCGA
GCGAATGCCCAACTACGAGGAGAAGCGAGAGTTCAGCAAGCTGCGCGACA
ACATCGCTGTTAGCTGGAAAGGATAGCAAGGCCCATTACAAGGAGGTGGT
GCAACGTATGTTAGTGCAAGCTTTCCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAGTGTCATATCATATCATATCATATCATATCACACTAGCTAGA
GATCTGGTCATGACTAGTGCTGATCTCACATAAAAACGCCGCGCACGACG
TCTGACATCAGATGAGTCTGAGTCATACTGAATCATCACAGGAGTTCAGC
GAGCTCGAATCCATACGCCCGCCTGCACTCATCGCGAAACTG
UFO06654.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bdbt-RA | 1000 | CG17282-RA | 73..926 | 9..862 | 4210 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21117931..21118784 | 862..9 | 4160 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:56 has no hits.
UFO06654.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:13 Download gff for
UFO06654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17282-RA | 66..926 | 9..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:48 Download gff for
UFO06654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17282-RA | 73..930 | 9..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:02 Download gff for
UFO06654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bdbt-RA | 73..930 | 9..865 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:02 Download gff for
UFO06654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21117927..21118784 | 9..865 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:48 Download gff for
UFO06654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16943649..16944506 | 9..865 | 99 | | Minus |
