UFO06667.5prime Sequence
1113 bp (995 high quality bases) assembled on 2009-08-24
> UFO06667.5prime
CAGTCGACATGATTGTCCCACGCCTGGCACTTCCCATTAGCCTTGCCCTG
CAGCGCGTGTCGCGCCGGGTGGCGGAACACCCCCATAACCTAAGGATCCT
GCAGCGCCACATGTCCAGCGTGTACTTTCGCAGTGGAGCCATCAAACCCA
AGCCCGAGGAGATGCCATTCGGCCTGCTGGCCATCTTCTGTGCCGTCATA
CCGGGACTCTTCGTGGGCGCCACCATCAGCAAGAACGTGGCCAACTTTCT
GGAGGAGAACGATCTGTTCGTGCCCGCGGATGACGACGACGACGAGGATG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAG
CCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGT
TGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGA
TTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGC
CAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACT
GCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTT
TGCTCATGGAAAACGGTGTAACAAGGTGAACACTATCCCATATCACCAGC
TCACGTCTTTCATGCATACGAAATTCCGATGAGCATTCATCAGCGGCAGA
ATGTGAATAAAGCGATAAAACTGTGCTATTTTTCTTACGTCTTTAAAGCG
TAATATCAGCTGAACGACTGTAAAGTAAATGGACACTGACTGAATGCTCA
AGTTCTACATGCA
UFO06667.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17680-RA | 701 | CG17680-RA | 116..406 | 9..299 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18147592..18147882 | 299..9 | 1455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:30:20 has no hits.
UFO06667.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:24 Download gff for
UFO06667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17680-RA | 113..408 | 9..305 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:31 Download gff for
UFO06667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17680-RA | 116..411 | 9..305 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:44 Download gff for
UFO06667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17680-RA | 116..411 | 9..305 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:44 Download gff for
UFO06667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18147592..18147882 | 9..299 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:31 Download gff for
UFO06667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14035097..14035387 | 9..299 | 100 | | Minus |
