UFO06669.5prime Sequence
1108 bp (996 high quality bases) assembled on 2009-08-24
> UFO06669.5prime
CAGTCGACATGTTCTCGAGAGCCGCTCTTCTAACAGCCCAGCGCCCCTTG
ACCGTGGCCGCCACCCGGTCGGCAGCCGCTGCTGCCGCTCCTGGCGGAGC
CATCGAGCGCCGCCAGCGCCCCGAGCATCCCGGCAAGGTCCGTCTGGGAT
TCCTGCCCGAGGAGTGGTTCCAGTTCTTCTACAACAAGACCGGTGTCACC
GGACCCTACACCTTCGGCGTGGGTCTGATCACCTATCTCTGCTCCAAGGA
GATCTACGTCATGGAGCACGAGTACTACAGCGGTCTGTCGCTCGGTATCA
TGGCCATCATTGCTGTCAAGAAGCTCGGCCCGGTCATCGCCAAGTGGGCT
GATGGCGAGATCGATAAAATCGAATCTGAGTGGAAGGAGGGACGCGAGGC
TGAGCTGAAGGTCCTCTCCGACGCCATCGAGGCCGAGAAGAAGGAGCAGT
GGCGCGCCGACGGTGCCCTGCTGCTGATGGAAGCCAAGAAGGAGAACATT
GCATTGCAGCTGGAGGCCGCGTTCCGTGAGCGCGCCATGAATGTGTACTC
GGAGGTGAAGCGTCGTCTCGACTACCAGGTGGAGTGCCGCCACGTCGAGC
GTCGCCTTAGCCAGAAGCACATGGTCAACTGGATCACCACCAATGTGTTG
GCCAGCATCTCTCCCCAGCAGGAGAAGGAGACTCTCAACAAGTGCATCGC
CGATCTGAGCGCTCTGGCACTGCGCGTCAAGTCTGCCGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGTCATACTGGATCTATCAACAGGAGTCAGCGAGCT
CGATATCAAATACGCCCCGCCTGCCACTCATCGCAGTACTGTTGTATCAT
AGCATCTGCGACATGAGCATCACAACGCATGATGACTGATTGGCACGGCA
TCAGACTGTTCGCTGGCTATAATTGGCATGGTGAACCGGGGCGAATGTCA
ATGGCAGT
UFO06669.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-b-RA | 918 | CG8189-RA | 70..798 | 9..737 | 3645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9730733..9731104 | 366..737 | 1860 | 100 | Plus |
| 3L | 28110227 | 3L | 9730309..9730640 | 34..365 | 1660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:00 has no hits.
UFO06669.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:22 Download gff for
UFO06669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-b-RA | 92..823 | 9..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:24 Download gff for
UFO06669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-b-RA | 70..801 | 9..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:22 Download gff for
UFO06669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-b-RA | 70..801 | 9..741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:22 Download gff for
UFO06669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9730733..9731107 | 366..741 | 99 | == | Plus |
| 3L | 9730068..9730095 | 9..36 | 100 | -> | Plus |
| 3L | 9730312..9730640 | 37..365 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:24 Download gff for
UFO06669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9723168..9723195 | 9..36 | 100 | -> | Plus |
| arm_3L | 9723412..9723740 | 37..365 | 100 | -> | Plus |
| arm_3L | 9723833..9724207 | 366..741 | 99 | == | Plus |
