UFO06670.5prime Sequence
1073 bp (961 high quality bases) assembled on 2009-08-24
> UFO06670.5prime
CAGTCGACATGGCCGAGCAGTTGCTGGTGAACACGACGTTGCCGATGGCG
GGGCGCCGTCTGGACCGGGATGTTAACCGGCTGTTGGCGTCGGGCTACCG
CACCACCGTGGACGACGACATGACCAACCTGAATGTTTGCCTCGAGGGTC
CACTGGGCAGTGCCTACGAGGGTGGCATTTGGACGGTAAATGTGACCATG
CCGCAGGACTATCCGTTGACGGCACCGCGCGTTCGCTTTGTCACCAAGAT
CCTGCACCCAAACATCGAGTTCATCACGGGCCTGGTCTGCATGAATGTCC
TTAAGCAGGCTTGGTCATCCAGCTATGACCTGGTCAACATATTCGAAACC
TTTCTGCCGCAGCTGCTGCGTTACCCGAATCCGCACGACTCACTGAATCA
CCGGGCCGCCGCCATCATGAAACACTCGGAGCAACTCTTTCGCGAGCACG
TTATCCTTTGCATGAAGACGTACGCCATGCCCGCCAACCTTCCGACGCGA
CAACTGGTGGAGGAGGGCCTCGAGAAACGCTCCTCGGATCTCAGTCTATC
CGACCTGCTAACGGACTCGGATGATGACGATGTTGGAAACAGGAACAACG
CACACATTGCCCTGCCAGGATCAAGCGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCTCG
ATATCAATTACGCCCCGCCCTGCACTCATCGCAGTACTGTGTAATTCATT
AAGCATTCTGCGACATGGAGCATCACAAACGCATGATGACTGATCGCCAG
CGCATCAGCACCTGTCGCTGCGTATATATTGCCCATGTGAACGGGGCGAG
AGTTGTCAATGCACGTTATCAACTGTGACTCACCAGAATGCTGAACGAAA
CATTTTCCATACTTAGGAATGCA
UFO06670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-RA | 902 | CG14739-RA | 183..800 | 9..626 | 3060 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12048355..12048972 | 626..9 | 3060 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:37:09 has no hits.
UFO06670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:10 Download gff for
UFO06670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 9..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:29 Download gff for
UFO06670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 9..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:15 Download gff for
UFO06670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 9..632 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:15 Download gff for
UFO06670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12048351..12048972 | 9..632 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:29 Download gff for
UFO06670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7874073..7874694 | 9..632 | 99 | | Minus |
