UFO06679.5prime Sequence
1026 bp (889 high quality bases) assembled on 2009-08-24
> UFO06679.5prime
CAGTCGGACATGTCTATAGAAAAAATCTCCTCCGAGCTGCGTAAGATGAT
AATATCTGACAATCCAATCGAAGCAACAACTTTCGATAAATCTGCAATAG
AGGCAACTTTGGATTCCAACAAATTCGAAGATCTACGAATTCCGAAGCAT
ACACTGAAGCAAAAGTTTCTTCTTCGAAAGTCAATAATTGAACATCCCTT
TAAAAGAATTCGTGCCGAAGGAGTGGATTGGGCTCACAAAATTCGAGACA
CCGACGAAGAGAAGGAATCTAATTGGGCAAAGATTGCGACTGGAAAGGTT
TCTGGCAATGCCTACGATCTTAAAACCATGATGAGCGAGTGTGAAAATAT
TTGTGGTTACGGAAACGCCATAAACTTGACGGTCCCAAGGGTGGACAAAC
TACAGGATCTGGCTAAATCGATCCCAACGGATCCCGATACAGTCTACCTG
ACCTGTCAATGTGATGATATTTTCTCTAATGGAGGCACAGAAGCTCCGAC
TCAAAGCCCCGACGAAGTTAATTTCGAAGAGCTGTCCAGCTACTTCGAAA
ATATGCTCAACATACCCAAGAATCTTCCGCTCAGCGCTGAAATAATGTAT
ACTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATACGCCCGCCCTGC
ACTCATCGCAGTACTGTGTAGTCATAGCATCTGCGACATGGAGCATCACA
AACGCATGATGACTGATCGCAGCGCATCAGCACTGTCGCTGCGTATATAT
TGCCATGTGAAACGGGGCGAGAGTGTTCAATGGCCACGTTTAATCAACTG
GTGACTCACCAGATGCTGAACGAAAA
UFO06679.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30487-RA | 728 | CG30487-RA | 73..667 | 9..603 | 2975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12937677..12938271 | 603..9 | 2975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:53:48 has no hits.
UFO06679.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:13 Download gff for
UFO06679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30487-RA | 73..675 | 9..611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:33 Download gff for
UFO06679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30487-RA | 73..675 | 9..611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:15 Download gff for
UFO06679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30487-RA | 73..675 | 9..611 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:15 Download gff for
UFO06679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12937669..12938271 | 9..611 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:33 Download gff for
UFO06679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8825174..8825776 | 9..611 | 99 | | Minus |
