UFO06683.5prime Sequence
1081 bp (959 high quality bases) assembled on 2009-08-24
> UFO06683.5prime
CAGTCGACATGGCTCTGCGGTTGATTAGCCGTTCAATGAGCTGCCACATA
CGTGGCTTGCAATTAAATGCCACCGGAAGACGGTTAAATAGTTACAACAT
CAGCCGGCTGGTTATTCTGCCTGCAACTTGGTCTTGCTCACAAAATCGCC
TGCTGCACGTGAGGATTACGGATCAACAAGCCGGTTTGGAGACCAAACGA
GAGGCCAACAGGAACCAGAATCCTTTTCGCGAAGAAGTTTTTGAAGAACT
TATCACAGCAGCACCCAAGGAGCACCAGAAGTTTAAGCCAGAAAAGAAAC
CCAAAGAGAAGTCCACCAAAAAGGTGCAGGATTTTGGTGATCCGGACACC
TTTGGCGATGCCAAGGTGGCTGCAACAGAAGACCCGGGTGATGTCGAGGA
AGAGGAGTTCCTTAGCAATTCCACTAGGCGCTCAAAGAAACTAAAAGCCG
TGGAATACGCCCGCCAAATTAAGGACCATCTTAAGGCGAATCGCCTAAAT
GAGGCCATCGCCGTGCTGGAGCAACGGATGCTAAAGGAGGATCGCGCCAA
GCCGGACAAGTACATATACAATCTGCTGATCAGTGGCTGTGCCAAGGCGG
GCTACACCCGCAAGGCCTTCTTCCTGTACACCAAGATGCGGCAACGTGGT
CTTCAAGTCACCGGAGGAACCTACACTTCGCTATTCAACGCCTGCGCCAA
TGCTCCCTCCGTGAGCGATGGCCTGGCCAAAGGCCCAAATCCTGCGGGAG
AACATGCTCGAGAAAGGGCTACGAACCAAATGTGAAAAACTACAATGCCA
TGATCAAGGCGTATGGAACGTGTGGCGATGTGGACACCGCCTACATGCTG
GCCGACGAAATGATGGAGCGCCAGCTGGAACTGAATGCAGATACATTCAC
TTTCTGCTGCAGGCGTGTGCCAGCAACTCGGAGCACGGTTTCGGCATGCT
CTGCTGACTTGCACACATGTGCAGCGAGTATAGCCGGACTACTACAGCTC
ATGCATGCTGGATGTGCAGGATTGTGCCTTCGTGACTGATCATGCCAGAA
GTTATCGATAATGCCCTCAGCTGCTAAAGAT
UFO06683.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4611-RA | 2248 | CG4611-RA | 95..1186 | 7..1076 | 4820 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5136470..5137424 | 7..961 | 4570 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:56:09 has no hits.
UFO06683.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:20 Download gff for
UFO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4611-RA | 83..1087 | 1..999 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:04 Download gff for
UFO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4611-RA | 89..1093 | 1..999 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:08 Download gff for
UFO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4611-RA | 89..1093 | 1..999 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:08 Download gff for
UFO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5136464..5137468 | 1..999 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:04 Download gff for
UFO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5129564..5130568 | 1..999 | 98 | == | Plus |
