UFO06690.5prime Sequence
1055 bp (962 high quality bases) assembled on 2009-08-24
> UFO06690.5prime
CAGTCGACATGGACATATTCGAGAGCTTCTGTCGCACGTGCGGAAACGAA
TGCCTGGAATCGCTGTCCATTTACAATGAGTGTGCCCAAGTGCTTGACCA
GATGGTGCCCATTGCGGATATGCTAGCGTCCTGCCTGCCCGCCTCCTTGC
CGCCACTGGACCCAGAGGACGACTATCCCAAACAGATCTGCCGCATCTGC
GTGAAGAAGCTGTCGATGGCCTACGAGTTCAGCCACCAGTGGCTGGGCGC
CCACGGCGAGTTCAACGTGGCCCTAAAGTTCGAGCAGCGCCGAAGGCGCA
GCCAGGCCAGCAAATCCCAGTCGCACACGCAAACCCAAACTCATCCGGTG
GAACCGAAGAATGAGCAACTGCCCACGGTGCTGGCGGAAGCAGTGTCGAC
CAAAAGAGCTGCTACTCCCACCAACGAGTTCAGCAGCGACTCCGGACCGG
CCTTCAAGTGCGGCTTCTGCGGCGAATGTTTTTACACGGAGAAGGCCTGC
AAATTTCACTTAAAGTTCTCGCACAAGGATCTTGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
ATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAA
GCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTG
TTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCAT
GATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATA
TTTGCCCATGATGAACGGGGCGAGAGTGTCATATGACACGTTTAATCAAA
CTGTGAACTCACCAGGATGCTGAACGAAAACATATCTCAATAATCGTTAA
GAATAGCAGTTCACGTAACCGCCATCTGCCAATATTGTGTAGAACTGCGA
ATCGT
UFO06690.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip1-RA | 691 | CG15367-RA | 56..580 | 9..533 | 2625 | 100 | Plus |
| Dip1-RB | 694 | CG15367-RB | 56..583 | 9..533 | 2585 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9158677..9159076 | 9..408 | 2000 | 100 | Plus |
| X | 23542271 | X | 9159138..9159264 | 407..533 | 635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:04:49 has no hits.
UFO06690.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:06 Download gff for
UFO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 23..551 | 1..533 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:17 Download gff for
UFO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 52..580 | 1..533 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:16 Download gff for
UFO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip1-RA | 52..580 | 1..533 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:16 Download gff for
UFO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9158673..9159076 | 1..408 | 99 | -> | Plus |
| X | 9159140..9159264 | 409..533 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:17 Download gff for
UFO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9053173..9053297 | 409..533 | 100 | == | Plus |
| arm_X | 9052706..9053109 | 1..408 | 99 | -> | Plus |
