UFO06693.5prime Sequence
1108 bp (991 high quality bases) assembled on 2009-08-24
> UFO06693.5prime
CAGTCGACATGATGCATATTTTGGTGACTCTGCTCCTGGTCGCTATCCAC
TCGATACCCACCACCTGGGCCGTCACCTGCACGGGCTGCGTGGATCTGGA
TGAGCTGAGTTTCGAGAAGACGGTGGAACGATTTCCCTACTCCGTAGTGA
AATTTGATATCGCATATCCGTATGGGGAAAAGCATGAGGCCTTTACCGCC
TTCTCCAAATCTGCCCACAAGGCAACTAAAGATCTGCTAATAGCCACCGT
GGGTGTCAAGGACTATGGAGAACTGGAGAACAAGGCCCTGGGCGACCGTT
ACAAAGTCGACGACAAGAACTTCCCGAGTATCTTCCTGTTCAAGGGCAAC
GCTGATGAGTACGTCCAGCTTCCTAGCCACGTCGACGTAACGCTGGACAA
TCTGAAGGCTTTTGTCAGTGCCAACACACCTCTGTACATCGGTCGTGATG
GCTGCATCAAAGAGTTCAACGAAGTGCTCAAGAACTATGCCAATATCCCC
GATGCAGAGCAACTGAAGCTTATCGAAAAGCTGCAGGCCAAGCAGGAGCA
GCTGACCGATCCCGAGCAGCAGCAGAACGCCAGGGCCTATCTGATCTACA
TGCGGAAGATCCACGAGGTGGGCTACGATTTCCTGGAGGAGGAGACCAAG
CGACTCCTGCGCCTCAAGGCCGGCAAGGTCACCGAGGCCAAGAAGGAGGA
GCTGCTGAGGAAACTGAACATCCTGGAAAGTCTTCAGGGTTCACAAAGGT
CACCAAGACAGCGCCGGAAAAGGAGGAACTGGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATT
CAGATGGAGTTCTGAGGTCATTACTGGATTTATCACAGGAGTTCAGCGAG
CTCGATATTCAAATTACGCCCGTCTGCCACTCATCGCAGTACTTGTTTGT
ATTTCATTAGCATTCTGCGACTTGCAGCATTCAAACGCATGTATTGACTG
ATTCGCGA
UFO06693.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wbl-RB | 1319 | CG7225-RB | 431..1201 | 9..781 | 3815 | 99.7 | Plus |
| wbl-RA | 953 | CG7225-RA | 65..835 | 9..781 | 3815 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19250303..19250799 | 283..781 | 2395 | 99.6 | Plus |
| 2R | 25286936 | 2R | 19249825..19250101 | 9..285 | 1385 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:01:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2867 | 477..589 | 151 | 65.8 | Plus |
UFO06693.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:05 Download gff for
UFO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wbl-RA | 58..848 | 1..795 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:29 Download gff for
UFO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wbl-RA | 58..848 | 1..795 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:11 Download gff for
UFO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wbl-RA | 58..848 | 1..795 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:11 Download gff for
UFO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19249818..19250100 | 1..284 | 98 | -> | Plus |
| 2R | 19250305..19250812 | 285..795 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:29 Download gff for
UFO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15137323..15137605 | 1..284 | 98 | -> | Plus |
| arm_2R | 15137810..15138317 | 285..795 | 98 | == | Plus |
