UFO06694.5prime Sequence
1073 bp (958 high quality bases) assembled on 2009-08-24
> UFO06694.5prime
CAGTCGACATGTCGGCTTCCGCGGACAGTCTGGGCGCCGCCGCAGCCCTG
GACAAGTACGGCGACGAGGACATCTTCAGCTTGCTAATCCGATACGGGCT
TTATGTGGGTGCTCTCTTCCAGTTCGTTTGCATTTCGGCCGCAGTATTGA
TGGAGAATAACCCGGATGGCCAAAGTAATCCGGAGTCCGGCGAAGTGACG
GAGCGGGAGGGCGAGCCGGTCCGGACGCGCCTGCACAAGATTCGTAAGCT
GGAGAAGAAGAAGCGACGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTG
CGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAG
CGATGAAAACGTTTCAGTTTGCTCATGGAAAACGTGTAACAAGGTGACAC
TATCCCATATCACAGCTCACGTCTTTCATGCATACGAATCGATGAGCATC
ATCAGCGGGCCAGGATGTGATAAGCGATAAACTGTGCTTATTTCTTACGT
CTTAAAGCGTATTCAGCTGACGGTCTGGTAAGGTACATGACACTGACTGA
ATGCTCAATGTTCTTACATGCAT
UFO06694.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4101-RA | 465 | CG4101-RA | 91..351 | 9..269 | 1305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16612576..16612836 | 9..269 | 1305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:01:46 has no hits.
UFO06694.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:10 Download gff for
UFO06694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4101-RA | 86..351 | 1..269 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:32 Download gff for
UFO06694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4101-RA | 86..351 | 1..269 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:18 Download gff for
UFO06694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4101-RA | 86..351 | 1..269 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:18 Download gff for
UFO06694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16612571..16612836 | 1..269 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:32 Download gff for
UFO06694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16605671..16605936 | 1..269 | 98 | == | Plus |
