UFO06695.5prime Sequence
1068 bp (963 high quality bases) assembled on 2009-08-24
> UFO06695.5prime
CAGTCGACATGGGTTTGCATTGGCAATGGCTGATCTGGGCATTGGTGGGG
CTCCATGTGGCACTGGCCACCAAGTGGTATGGCGGTGGAATGGACTTCAA
TGATCCCACCGCCTGGCTAGATGACCACTTGCCTTGTGCACAGGATTTGG
TCGTTTTTCCAGAGTACTACCCAGCTCTGCTGCCCTTGCCCGAGGACATA
TCCATTGATGGCTTGGTTTTCCCCAGAGAAGGGGCGATCCTTTTGGCAGA
GGAATCCACCATTACCTTTGGATCTGATAAGCAGCCCTCCTGTGAGAGCG
ATGAGAATAAGGCCTATTTGAAGCCACCGAAGTCGAGTAAATGGTTCGAT
CCTGGCACCTGGACGGACAAATCTAAGGAATTTTCCACATTCACACCAGA
GCTGGAGAGGATTCCCTGTGATGACGAGCAGGTCATAATCAAGGGGCACG
GACCATTGGCCTTTGACCTAGAAAACGTGCAGTATCTGAGGCTGGGACAG
CTTATTCTGGCTGGTTCTTCCATTTCCAAAACGTACTTGGAGCAACTTAT
CAGCAGAGATCTGGGCCAGTTTCTCTTTTACAATGCCGAGTACGTCCAGG
TGGAGTACTACAGAGGAGAGCTGTGTGGCTGCCACAAGGACTTCGAGCGA
CTGCTGGAACCCGTTTGCCATAATGTCCAGGAGCAGTGCGAGACGCCCCA
CTGCTTGTCTCCAGTTCGACCCTTGGGATCGTGCTGCCTAATCTGCGGGG
CCATTCTATCCACGCCCACGACCCACTGCACCGAGGGCAGTAGAAAGGAG
TTGGTGGCCCAGATAAGTAACCTCATCAGCCAGGAGAGCCTGAAGGATCA
GATCGGCCTACACGTGGAGTTTGTGGGCTCCCAGAAGTTTGGAAACTGCC
TGCAGCCGGTGGTAACTGATCGCCATAAATTATAGTGAACGGAGCTTGGA
GTTTCTACAGCAAACCGAACACAATTGGAACAAGAACGAACAACGTAAGG
TTTCTGGTCGACCTATATCGATGTAGCTTCTCCTCGATGTTCCCATCCTT
CGCATGACTGTGGGCTGA
UFO06695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amnionless-RB | 1893 | CG11592-RB | 226..1275 | 9..1050 | 4940 | 98.6 | Plus |
| Amnionless-RA | 1681 | CG11592-RA | 14..1063 | 9..1050 | 4940 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 287913..288919 | 1013..9 | 4815 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:31 has no hits.
UFO06695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:09 Download gff for
UFO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11592-RA | 1..1055 | 9..1056 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:25 Download gff for
UFO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11592-RA | 10..1068 | 1..1056 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:02 Download gff for
UFO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amnionless-RA | 10..1068 | 1..1056 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:02 Download gff for
UFO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 287861..288923 | 1..1056 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:25 Download gff for
UFO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 287861..288923 | 1..1056 | 97 | | Minus |
