UFO06696.5prime Sequence
1071 bp (959 high quality bases) assembled on 2009-08-24
> UFO06696.5prime
CAGTCGACATGTGTTGCGGGCCCTGCTGTGGAACTTGCTACTACCCTTGC
TGTAGCCCCTGCTTTAGTGGCCGTTGTTTTGGACCACGATGCGGATTCTA
TAGTGGACCATGTGGACCTTGCTGCGGGGGCGGATGCTGCAGCAGCTGCG
GACCGTCTTGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAA
CTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTT
AGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATA
TGTGTAGAAACTGCCGGAAATCGTCGTGCTATTCACTCCAGAGCGATGAA
AACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGCTGAACACTAT
CCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAATTCCAGATGA
GCATTCATCAGGCGGGCAAGATTGTGAATAAAGGCCGGATAAACTTGTGC
TTATTTTTCTTTACGGTCTTTAAAAGGCCGTATATCCAGCTGACGGTCTG
GTTATAGGTACATGGAGCACTGACTGAATGCTCAAAATGGTCTTTACGAT
GCCATTGGAATATCACGGTGGTTATCCAGGTGATTTTTTTTCTCATTTAG
CTCTAGCTCCTGAAAATCCAT
UFO06696.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30430-RB | 355 | CG30430-RB | 97..249 | 9..161 | 765 | 100 | Plus |
| CG30430-RA | 498 | CG30430-RA | 124..276 | 9..161 | 765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25129611..25129763 | 9..161 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:59:13 has no hits.
UFO06696.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:09 Download gff for
UFO06696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30430-RA | 116..282 | 1..170 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:06 Download gff for
UFO06696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30430-RA | 116..282 | 1..170 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:57 Download gff for
UFO06696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30430-RA | 116..282 | 1..170 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:34:57 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:58:06 has no hits.
