UFO06708.5prime Sequence
1041 bp (828 high quality bases) assembled on 2009-08-24
> UFO06708.5prime
CAGTCGACATGGATCTGATAAATCCGTATATGCGCCATCATAGTTTTGCG
GCCGCCGCCCAGGGAAGTCCCCCGTCGGCGGCTCAACGTCATCATTTGGC
GGCGGCCATGAGCAATGGCTTCGCGGATGTCCATGCCCATGCGATGGCGG
CGGCGGACTATCAACAACAGTTGGCCGATTACCACAGTGCAGCGGCGGCA
GCGGCCGTTTATGCCAACAACAATAATAATAATAACAATAATAGCAGTAA
CAACAACAACAGCAGTCCGCTAATGTTGCTAAAGGCGGCACATGGCGGAG
GTCTCAAGGATTCGGACTCGCCATCGACGACACCGCCACCCGCCTCTTCT
AGACTCCATTCTGACTCCTCGCCATCTCCGCGATACGAACACAATTCCAG
TCCCGGTGTGGACAGTGCCAAGTCGTATGCCTTGAGCCAGAGGAGCAGCG
GAGCGGAGGATCCATGCCAGACCAGCGAATCCGCCAGTCCACCGCCGCAG
GGCCAGAACGACTACAGTCCCGAGAATCTCAGCAGCCAGAGGGCAAAGTT
CCAGCACCATCATGGAGTGAACCCACTGGCTTTGCACAATGCCAACCATG
CCGGAAACCCCGGATGTCACAACAACAATAACCACATGGACCACAAGCTC
CCACTGAGTTTTCTCGGTCCCCCGCTGGCCGCTCTTCACTCGATGACCAC
GGAAATGAAGGGTCAAGGAGTCGGTGGATCGTCGGCGTCGGCAAATGGCT
TGTCCTATAGCCACAGCCCGAATTCGCATTTGATCAGTGATCGCGGATCC
TGTGGCAGCTCATCGTCGTCCTCCACCACGACTACGAACACCAACAGCCA
GGGTGCACCCAATCAGCACGGCATCGATACCATCTCTCAAACACGCGGTG
ACATCGGCGGGATCTAAGTGCTTAACAGTAGCTTGCATTCCCGCTTCTCG
ATCGCCGCCGCAGCAGCGGAATGATCTAATATCTATCGGAAAGCCAGGGC
GCCCTGAAACCCAGCCGAACATAGTGACGCCACGCAACTGT
UFO06708.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HGTX-RA | 3014 | CG13475-RA | 824..1875 | 5..1041 | 4640 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14597838..14598717 | 884..5 | 4355 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:37:07 has no hits.
UFO06708.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:42 Download gff for
UFO06708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HGTX-RB | 269..1263 | 1..988 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:11 Download gff for
UFO06708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HGTX-RA | 820..1814 | 1..988 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:30 Download gff for
UFO06708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HGTX-RA | 820..1814 | 1..988 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:30 Download gff for
UFO06708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14597786..14598718 | 1..931 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:11 Download gff for
UFO06708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14590886..14591818 | 1..931 | 98 | | Minus |
