Clone UFO06712 Report

Search the DGRC for UFO06712

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:67
Well:12
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06712.5prime Sequence

1068 bp (976 high quality bases) assembled on 2009-08-24

> UFO06712.5prime
CAGTCGACATGGCACCCACAGCAAACACAGTGCTAATTACCGTGCCGCGG
ACAGCAATCACATCGAATAATCTGCCCAAATTGCGGCCCGCCCCCCTTAC
GGCAGCTCTGCTGAAGGTGTCGGCCACGCCCTCCGCCTCGCCCACGCCCT
CGAGTTCGGGATACGCATCCTCGTCGAACATGGATGACGATAACATGGCT
GCATCCCAGCCCAAGGCCAAGAAGCGTCGCCTGGACCATCTAACCTGGGA
GGAGAAAGTGCAAAGAAAGAAGCTAAAGAACCGTGTGGCCGCCCAGACAT
CGCGTGACCGCAAGAAGGCACGCATGGAGGAGATGGACTACGAGATCAAG
GAGCTGACAGACAGAACGGAAATACTACAGAACAAGTGCGATAGCCTGCA
GGCCATCAACGAGTCACTGCTGGCCAAGAACCACAAGCTGGACTCGGAGC
TGGAGCTGCTGCGCCAAGAACTCGCCGAACTGAAGCAGCAACAGCAGCAC
AACACCAGATGCATCAGCCAATCCAACGCCAGCGCAGGCGCTGAGGGCTG
TGCGTCCACCAACCTTGGATCTGCAGCATCCAAAGCTGACCCTCTGCCGC
AGGGTATACAACAGGTGGACACACAGTCGTCAGCGCGTCTGCTGGCGGAG
CAGCTGAAGAGCAGCAAGAGCCTGGCCTCACTCTGGAAAGTTGTGGCCCT
CTGCCTACTCTACAAGACATGCTTGGCGTCGACGAAGAGTTCGACGTCAA
GCGCCTCGAAGAGCTGGCCGAAAGTCTGCTCGCAGATATCACAGCAGACC
TGGAAACAGCGCTGGAGCGAGCAGCCCAGCTGCTGCCCAAGATGCAGGCA
ACGCAGAGCGATTGCCTGACCAATGGTGGGGCCCGCAGCAGAGCGCTTGA
ATCCGACGGGCATAGAGCTAATGCCGCAGCTTTCTAGACCATTCGTTGGC
GCGGCGGGCCCAGGTTAGTTGTTCATATTCATATCATAATCATATTCATA
TTCACACTAGCTAGGAGATCTGGTCATGACTAGTGCTGCATCTCACCAAA
TAAAAACGTTGCGCACGG

UFO06712.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:26
Subject Length Description Subject Range Query Range Score Percent Strand
Xbp1-RD 2138 CG9415-RD 327..1246 7..923 4525 99.7 Plus
Xbp1-RE 2119 CG9415-RE 331..1227 7..923 4170 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21144201..21144858 269..923 3140 99.5 Plus
2R 25286936 2R 21143875..21144137 7..269 1315 100 Plus
Blast to na_te.dros performed 2014-11-28 23:04:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3254..3342 452..539 172 67.4 Plus
roo 9092 roo DM_ROO 9092bp 1048..1177 408..532 150 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2417 432..537 138 61.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..6890 427..533 132 59.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2756..2879 425..546 130 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2779..2822 478..520 127 79.5 Plus

UFO06712.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:46 Download gff for UFO06712.5prime
Subject Subject Range Query Range Percent Splice Strand
Xbp1-RC 324..1250 1..923 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:00 Download gff for UFO06712.5prime
Subject Subject Range Query Range Percent Splice Strand
Xbp1-RD 320..1246 1..923 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:02 Download gff for UFO06712.5prime
Subject Subject Range Query Range Percent Splice Strand
Xbp1-RD 320..1246 1..923 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:02 Download gff for UFO06712.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21143868..21144136 1..268 98 -> Plus
2R 21144201..21144858 269..923 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:00 Download gff for UFO06712.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17031373..17031641 1..268 98 -> Plus
arm_2R 17031706..17032363 269..923 99 == Plus