UFO06714.5prime Sequence
1088 bp (973 high quality bases) assembled on 2009-08-24
> UFO06714.5prime
CAGTCGACATGGAAACGGCGTTGGCTGAAGTGCAACTTTCCTGTCTGCTG
TGCGAGCAGACTTTTGATGCCACTGAGAAGCTGGACGAACACCTCCCCAC
CCACTTTCCGCAGCCTGTGAGCACTGGTCAAACATGCGATATATGCGGGC
GCACGATGCGATCCTCGCTGGAACTGCACCAGCACTATAAAAGATACCAT
GAAGCCCATGTGCCCAACACAGAGGGACACTTTCAATGCCAGCTCTGCGA
CAAGGTATTCCTCCTCCAGGATCATCTCAAGGTACACGTGAAGATTGAGC
ACGCGACCGATGGCTACCAACCAGATGAGAAGTCCTTAGATTGGCAGCAC
TACTCTCCCAGAAGTCTAGACACAACAAACGATTATAAGCTGGATCCCAT
CTTGTGTCCTCCACCAAAGAGGAAGTATCCGCCGCGCTCCCCCTTCTTCA
ATCCGAATCTCTGGCTAGGCGCTGACAACTGTTTTATGGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAACGGGGGACGAGAAGTTGTCCATATTGG
CCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAAACG
AAAACATATTCTCATAATCCTTTAGGAAATAGCAAGCTTTCACGTACACG
CCCATCTGCGATTATATGTGTAGAACTGCGAATCGGTCTGCTATCCATCG
AACGATGAACGTTTCAGTTTGCCATGGAAACGGTTAAC
UFO06714.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12744-RB | 839 | CG12744-RB | 167..646 | 9..488 | 2400 | 100 | Plus |
| CG12744-RA | 906 | CG12744-RA | 234..713 | 9..488 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9875514..9875960 | 9..455 | 2235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:55:44 has no hits.
UFO06714.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:38 Download gff for
UFO06714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12744-RA | 231..710 | 9..488 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:44 Download gff for
UFO06714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12744-RA | 234..713 | 9..488 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:52 Download gff for
UFO06714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12744-RA | 234..713 | 9..488 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:52 Download gff for
UFO06714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9875514..9875959 | 9..454 | 100 | -> | Plus |
| 2R | 9876016..9876049 | 455..488 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:44 Download gff for
UFO06714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5763019..5763464 | 9..454 | 100 | -> | Plus |
| arm_2R | 5763521..5763554 | 455..488 | 100 | == | Plus |
