UFO06725.5prime Sequence
1115 bp (998 high quality bases) assembled on 2009-08-24
> UFO06725.5prime
CAGTCGACATGGTTTACTTTAGTCCGCGTGGCATGCAACCGTGTAGTCCA
GCGGGAGAAATCGCAATGATGCCGCCTTCGAAGAGCCCCGTGATGGAGAG
CGCCGCCTCCGAACAGAATCCTGCCCAGCAGAGCCAGCAGCAGGACGAGC
AGAGCGCCAAGCGGGCGTGTCCCCTAAAGTTTTCGATAGCCAAGATCATG
GAGCCGGATCACAGGCCCAGCCAAGTGCCACCGCCGCAGCCCGCTCCGGT
TTCCTTCGCCACCAACGATGACGACGAGGATGAGGATCCGGAGATCGATG
CCGACTCGGAGCGCTCCTGCAGCCCCATCGAGGTGATCAGCCTGGATCAG
TCGCCATCCACTGTCAACTATGACTCCGCTTTCAAGAAGTATGTGCCGGG
TCCGTGTTCGGGCGCCACTTCATCGGTGGCCTCGCCGCCGAGCACCGCTG
CTGTGCAGCAGTTTGTGAGCTCCCGCCACCAGGAGCTGCTCTCGCAGTAT
CCCCTGCTGTACTATGCACCCAATCAGCTGATGTGCGCCGCTGCTGCCGC
CCAATATGCAGCCCTTACCGCCCAACAGCAATCGCTGGCCAGCGCCGCCC
ACCTGAGCAGCTTCACCGCATCCCTGAATGCCAGCTTGCATCACTCGCAG
TCGCTGAGAAGAAATCTGGGTCATCCACTGGCCGCGGCAGCTGCCGTGGC
GGCAGTGGCCCAATCCCAGGCGGTGCCCAATTTGCAACATACCCTGAAAA
GTCGCCAGTGGCCCAGAGAACAGCCCAGAGTTCGGGATTGCAAGCTAACT
TGAAGAGGAAACGATCGCCGCAGATCAGGCGAAGTGACGCCGCCTCCAGC
GTCTACTGCCACTTCCGCCACTGGAGCAGATCCCGCTCCCCTCGCCGCAA
GGATCCATCGAGGACAGCAGTCCCGGATCGGCCAGTGCGCAAGCCCAGAC
CTCTCCTGCCTGGAATGGTGGCAGGTGTCACGCCACTACAACTCACCCGC
CACATGCCCGTCCACACGAGCAGCGTTGTTTGCAAGTCTGCGCAGGATCC
GCCAGCTCGAACTCTCTGCGCAGAATCATCCAACGTCGAAGGCCGCCAAG
TCGACTGCGAGGCTC
UFO06725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| erm-RD | 2881 | CG31670-RD | 229..1282 | 9..1042 | 4745 | 97.9 | Plus |
| erm-RC | 2881 | CG31670-RC | 229..1282 | 9..1042 | 4745 | 97.9 | Plus |
| erm-RA | 2881 | CG31670-RA | 229..1282 | 9..1042 | 4745 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1951870..1952879 | 1017..21 | 4380 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:08 has no hits.
UFO06725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:33 Download gff for
UFO06725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31670-RA | 195..1222 | 9..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:50 Download gff for
UFO06725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| erm-RA | 229..1256 | 9..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:54 Download gff for
UFO06725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| erm-RA | 229..1256 | 9..1024 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:54 Download gff for
UFO06725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1951845..1952879 | 21..1036 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:50 Download gff for
UFO06725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1951845..1952879 | 21..1036 | 97 | <- | Minus |
