UFO06735.5prime Sequence
1045 bp (954 high quality bases) assembled on 2009-08-24
> UFO06735.5prime
CAGTCGACATGACGCGCGTAACGAGAAGTGAAATCTCCCTGGACATGGAG
TTCTGGGTGGAGGAGCTGTCGCCGGCACAATTGGCGTACTACGAGAAGAT
TACTAACGAGCACAACGCGGTGAAGGGTGCACTAAAGAACGCGGTTAGCG
CCAACGAGGGCAAGGAGCTGTTTAACGGCCAGGTGTTCCAGGCCTACTCC
TTTAAGGGCAAAGTGCTGCAGGAGCTCAAGGAGGCTACGCTGCCCAAAAA
ACCACCCAAGCCGACGGACTCTCCCTCAACACCCGCCGCCCAAAGCGGTG
GCACAGGGCGGGGTCGTGGCCGCCCACCACGACAACCATCCAACATCGCC
TACCTGGAGTCCTCCGATGAGGGAGACGACGATATGCCGCTGGCCAAGCG
ACTGGCGCTGTCTGCAGGCAAAAAAGCAGTGGCCGTGGCCAATGCATCTT
CCTCGTTCACCCCGAAATCCAGTAAGAAGGCTGCATCCGCTGCTAGTGGA
GGATCTTCTTCACCGGTACCTAAGAGCAGTGGAAAACTATTTAAGGAATC
CAAACCGGACATCGAATCGCCGCCGAAGAACTACCGCCCCGCCGAGGTTA
ATTCGGTGGGCGGTCTGGTGGTGGGCAGCACCGACGAAAGCAAGGATAGC
AAAGACGGCAAGGATGGCAAGGATAACAAGATGCAAGGAAAGACATATCC
ATCTCTGGTGGTGCTAGCAAAGCCTTTTCTCAAGATCAAAGACATGGCTG
CCACCCGCAGCAAGCTGGACTCGAAAGGTTAAGCTGGTGCTCATGCTTAC
GCCCAATAAATTCTGCGAGTGGCTGCTCCAGGAGGGATTGCTACGCGCTC
AACAGCATTGCATAAACCATCGCAACACGAGCTCAAATTGGAATTTATCG
GATGTGACAGTTTCCCTACACTGGTGGCTATGTGTGATCAGCGATGTGCC
CCTACGCTCGTCTCGTGTCACATCATTCGAGACTCAGCACCAACAATTCT
GTGAGTATTACACTGGCCTGCCGACAGATCCAATGTGGTGCAATG
UFO06735.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| row-RC | 4414 | CG8092-RC | 146..1110 | 9..964 | 4565 | 98.9 | Plus |
| row-RB | 2281 | CG8092-RB | 146..1110 | 9..964 | 4565 | 98.9 | Plus |
| row-RA | 4414 | CG8092-RA | 146..1110 | 9..964 | 4565 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15212607..15213489 | 891..9 | 4320 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:30 has no hits.
UFO06735.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:33 Download gff for
UFO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8092-RB | 137..1113 | 1..968 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:58 Download gff for
UFO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| row-RA | 139..1115 | 1..968 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:05 Download gff for
UFO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| row-RA | 139..1115 | 1..968 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:05 Download gff for
UFO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15212507..15212555 | 891..936 | 93 | <- | Minus |
| 2R | 15212607..15213496 | 1..890 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:58 Download gff for
UFO06735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11100012..11100060 | 891..936 | 93 | <- | Minus |
| arm_2R | 11100112..11101001 | 1..890 | 99 | | Minus |
