UFO06737.5prime Sequence
822 bp (40 high quality bases) assembled on 2009-08-24
> UFO06737.5prime
CAATCCACATGGAGCGCAAGGAAGTGGACGCCCATCGGTTCATCAACCAT
ACCCTGCTGGAGAGCCACTTCATCATGGATCTGATAGATCATACCTACAA
ATCCGAAGGACCCACGAATCTGAACACGAATCCCAGTTCCGGCAACTCCA
ATAGCGGATTGGGTTACGTGAAAAAGGAATCCCTGACCCCTGATCTGAAT
TTCCACCACACCATCTTTCAGTTTGTGAACAAATCATCGCCAGAAAATGA
TGTTGTACCCCACCAAGTGGATGCACAGCCCACATTTCCGGCCCTGGCCA
TTGAGCCCACAGAGCCCATCTACGTGTCCGCGGGTCTACTGGAGGACCAG
GATCTCCTCTATGCGCACAACAACGCCTCCTGCACAAACGCCCGCGAGGT
GCGGCCCCACAAAAAACGCATTTCGCGGAAGCTCAAAGGCAACATAGACC
CCGAACTGGACCACCAGCACAAGCATGTCCAGGATGTGGCACCCTCTTCC
CTGTATAGCTGTGAAATATGCGGCTATGCTGTGCACACCCAATTGGACTT
CTTTGCCCATCTGAAGCACCACTACAAGCCCACCGTTCTGGAGCAGAGCC
TGGGCATCCAGCATCCCCATCGACAGCACCATCAAAAGGAACTGCTCGAC
ATGTGTGGTTTGTCTGCGCAGGATAAGCTGCAACAGGAGCAGGCCAAATT
GGATCTGGTTTTTCAGGACGTGCAGCTTAATTTTGAGAACTTTCACGACA
TCACTCACCATGTGAACGATGTTGCCAACGTCTGAGTGAATATGGTGCTG
CATGGACAAGCCACGGACAATC
UFO06737.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3407-RA | 2418 | CG3407-RA | 81..892 | 9..820 | 3370 | 94.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3812595..3813218 | 677..54 | 2565 | 94.1 | Minus |
| 2L | 23513712 | 2L | 3812392..3812536 | 820..676 | 665 | 97.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:01:21 has no hits.
UFO06737.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:23 Download gff for
UFO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3407-RA | 75..889 | 2..822 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:45 Download gff for
UFO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3407-RA | 78..892 | 2..822 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:02 Download gff for
UFO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3407-RA | 78..892 | 2..822 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:02 Download gff for
UFO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3812389..3812534 | 678..822 | 95 | <- | Minus |
| 2L | 3812595..3813221 | 51..677 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:45 Download gff for
UFO06737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3812389..3812534 | 678..822 | 95 | <- | Minus |
| arm_2L | 3812595..3813221 | 51..677 | 93 | <- | Minus |
