UFO06749.5prime Sequence
1068 bp (957 high quality bases) assembled on 2009-08-24
> UFO06749.5prime
CAGTCGACATGTCCGCTTCAGTGAGCAGTAAGAGCACCGTGGTATCCTCC
ATCATCTCGGGCCTCCTGAGCATTGTTTTGTTCGGCACACTGCGTTTCTG
CTCAGAATGGTTTAACGACTCGCAGCTGAGGGTCCTTTTGGGCGGATACC
TCTTCTCCTGGGTGTTCATCCTGAGCCTCACGTGCGTCTCCAACGCGGAG
ATGGTTGTTTTCGGCCAGGACTTCCAGGCCAAGCTGCTACCAGAGATTAT
TTTCTGTCTCTCACTCACGGTGGCCGCCGCGGGACTCGTGCATCGTGTCT
GCGCCACCACCAGTGTTCTCTTTTCCCTGGTGGGGCTCTACTTCCTTAAC
AGGATCTCCACGAAGTATTACTCCGTTCAGGTGCCCAGCGTGGATGCTCC
TACGACGAGAAAGGGCGGAAAGAAGTTCAAAGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAAATCAAAACTGGTGAAACTCACCCAGGATTGGCTGAGACGAAAACAT
ATCTCATAAACCCTTTAGGAATAGGCCAGTTTTCACGTACACGCCACATC
TGCGAATATATGTGTAGAACTGCGAAATCGTCTGTATTCACTCCAGAGCG
ATGAAACGTTTCAGGTGCTCATGGAAAACGGTACAGGTGAACCCTATCAT
ATCACAGTTCACGCTCAT
UFO06749.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31460-RB | 717 | CG31460-RB | 211..633 | 9..431 | 2115 | 100 | Plus |
| CG31460-RA | 554 | CG31460-RA | 48..470 | 9..431 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8562943..8563361 | 13..431 | 2095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:06:56 has no hits.
UFO06749.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:14 Download gff for
UFO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31460-RA | 25..464 | 1..441 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:18 Download gff for
UFO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31460-RA | 41..480 | 1..441 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:11 Download gff for
UFO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31460-RA | 41..480 | 1..441 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:11 Download gff for
UFO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8562940..8563361 | 8..431 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:18 Download gff for
UFO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4388662..4389083 | 8..431 | 99 | == | Plus |
