UFO06751.5prime Sequence
1125 bp (1022 high quality bases) assembled on 2009-08-24
> UFO06751.5prime
CAGTCGACATGAACAACCAACTGAATCCGGCCACCTACCGCAAGTTTAAC
AATCTGCTCAGTAGCGGAGCGGTCACTGTGACCGGTCCCAGCCAGCCGCG
AATCCTCAAGTCGACGCGTATGGTGGTACCCGGTGGTGGCGGAGGAGGAG
GTGCCTCTGCCGGAGGAGCCTCAGCCGTTGGCGGCGTAGCACAGCAGCAG
GCGGTCAACGATGCAGAGTCGGGTGGCGTGGGTATCGGCGGATTAGCCAC
GCGATGCTATATCTGCGATGACCGCTGCGAGCCACAGACTTCGCTAACCG
ATATGTGCACCACGCACACTTCCACCAAATTCCCCAACAAACTGGCCCAG
CTCGTGGGCGAGGGTTTCCTCGTGATTGTTTGCGGCGAGGATTACGTGTG
CTCACGCTGTACCAACCTGGTGAACTACTACGACCGCCTGGAAAACGATG
TGGAGCGCGTCAAGACGAACCTCATCAGTTTGCTTAACAAGAAGTATGCC
ATTAACGAGGATATGGGCCAGGAAGGCAGTCCGCCGCTCAAGATGCAGAA
AATGGTCGGCGGATCCGCCAATCGCTCGTTGGAGGAGAGTCCTAGTGCGG
ATTTGCTGCGTCCACGTAAACTCCTGCAGGGAAACCCAGTTGGCCAGTCC
AAGATCGCCCCAGGAACCACCCAGAGCAGCGTCCAAGGCACCCAGACAGT
CCAACGCAAGGCCACCAAGATTTATAAATGCACCTCGTGTGACTATAAAA
CCTCGGATATGCGGCTGTTCAACACGCATTATGAAACCTGCAAGCAGCAG
ACCTTCCAGTGCAAGACCTGCCGCAAAATCTTCCCGCACTTTGGGGCCAT
GAAGCAGCACATGGTGCGCGACCACAATACCGCCATGGATACACGTGTGC
CATGTGTCACATTAACTTCGTGAACGAGAACAGCCTGCGCAGCACATGGA
GACGATCACGCTACCAATGTACTGGTGACAGCACCACCACCATACGCATC
AGCTGCTCCGTGCTGCTGCTGCAGCTGCCGCTGCACTGCTGCACAAGAAT
CTGGTTGGAAATCGCTATACCATGCCATCATGCAGTCAGTCACGACAGTC
GTTTTGATAACATTGGCCAACATGC
UFO06751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pzg-RB | 3824 | CG7752-RB | 335..1424 | 5..1081 | 5100 | 98.5 | Plus |
| pzg-RA | 4093 | CG7752-RA | 335..1424 | 5..1081 | 5100 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21286433..21287067 | 5..639 | 3160 | 99.8 | Plus |
| 3L | 28110227 | 3L | 21287125..21287570 | 637..1070 | 1690 | 96.6 | Plus |
Blast to na_te.dros performed 2014-11-28 20:37:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 577..643 | 386..320 | 110 | 62.7 | Minus |
UFO06751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:13 Download gff for
UFO06751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pzg-RA | 369..1467 | 1..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:53 Download gff for
UFO06751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pzg-RA | 333..1431 | 1..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:35 Download gff for
UFO06751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pzg-RA | 333..1431 | 1..1086 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:35 Download gff for
UFO06751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21286431..21287067 | 1..639 | 99 | -> | Plus |
| 3L | 21287128..21287589 | 640..1086 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:53 Download gff for
UFO06751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21279531..21280167 | 1..639 | 99 | -> | Plus |
| arm_3L | 21280228..21280689 | 640..1086 | 96 | | Plus |
