UFO06753.5prime Sequence
1152 bp (1018 high quality bases) assembled on 2009-08-24
> UFO06753.5prime
CAGTCGACATGAATAGCACTAAAGTGCCGCCCGAGTGGAAGAGGCGTGTC
AAGTCGGAGTACATCAAAATCAGGCAGCAGAAGCGCTACAAACGTGCCGA
CGAGATCAAGGAGGCGTGGATAAGAAACTGGGACGAGCACAACCACAATG
TACAGGATCTGTACTGCGAGTCGAAGGTTTGGCAGGCTAAACCCTACGAT
CCGCCGCATGTGGACTGTGTGAAGCGGGCGGAGGTGACTAGCTACAATGG
CATTCCCAGCGGTCCGCAAAAGGTGCCCATTTGCGTGATCAACGCGGTCA
CTCCCATACCCACCATGTACACGTGGGCACCAACACAGCAGAACTTCATG
GTGGAGGATGAGACGGTGCTGCACAATATACCCTATATGGGCGACGAGGT
CCTCGATAAGGATGGCAAGTTCATAGAGGAACTGATCAAAAACTACGATG
GCAAGGTTCACGGCGACAAGGATCCCTCGTTCATGGACGATGCCATCTTC
GTAGAACTGGTGCACGCCCTTATGCGCTCCTACAGCAAGGAACTGGAGGA
AGCCGCTCCGGGTACAGCGACTGCCATTAAAACAGAGACGTTGGCGAAAT
CAAAACAGGGCGAAGATGATGGGGTAGTTGATGTTGACGCAGATGGTGAA
TCTCCCATGAAGCTTGAGAAAACCGACAGCAAAGGGGATCTGACTGAAGT
TGAGAAGAAGGAAACTGAAGAACCGCTGGAGACTGAAGATGCGGATGTTA
AGCCCGATGTGGAAGAAGTCAAGGACAAGCTGCCCTTCCCTGCGCCCATT
ATTTTTCAGGCCATCAGCGCTAACTTTCCAGACAAGGGCACCGCGCAAGA
GCTCAAAGAAAAGTACATTGAGCTTACGGAGCACCAGGATCCGGAGCGCC
CACAGGAGTGCACACCCAACATTGACGGCATCAGGCCGAGAGCGTTTCCC
GGGAAAGGACTATGCACTCCTTTCACACGCTCTTCTGTCGTCGTGCTCAA
ATACGACTGCTCCTGCACGCTGCAGGACATGGCGGGTCCCATCTCCAGAA
GCGTCGCTATCGGACTGAGGCTTTCGCCGGACTTGCAGCACTCCTGCTCA
TGTGATCGATGGCATGAAGAAGCGGGCGGGCGATACTGAACCCTCCATTG
AT
UFO06753.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(z)-RB | 2464 | CG6502-RB | 119..1262 | 9..1135 | 5210 | 98 | Plus |
| E(z)-RA | 2650 | CG6502-RA | 305..1448 | 9..1135 | 5210 | 98 | Plus |
| E(z)-RC | 2479 | CG6502-RC | 119..1277 | 9..1135 | 5060 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10636843..10637578 | 865..130 | 3680 | 100 | Minus |
| 3L | 28110227 | 3L | 10636652..10636784 | 994..863 | 615 | 99.2 | Minus |
| 3L | 28110227 | 3L | 10637639..10637761 | 131..9 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:19:45 has no hits.
UFO06753.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:10 Download gff for
UFO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(z)-RB | 111..1255 | 2..1129 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:30 Download gff for
UFO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(z)-RA | 298..1442 | 2..1129 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:57:32 Download gff for
UFO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(z)-RA | 298..1442 | 2..1129 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:57:32 Download gff for
UFO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10636049..10636093 | 1019..1061 | 91 | <- | Minus |
| 3L | 10636624..10636784 | 863..1018 | 96 | <- | Minus |
| 3L | 10636846..10637577 | 131..862 | 100 | <- | Minus |
| 3L | 10637640..10637768 | 2..130 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:30 Download gff for
UFO06753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10629149..10629193 | 1019..1061 | 91 | <- | Minus |
| arm_3L | 10629724..10629884 | 863..1018 | 96 | <- | Minus |
| arm_3L | 10629946..10630677 | 131..862 | 100 | <- | Minus |
| arm_3L | 10630740..10630868 | 2..130 | 96 | | Minus |
