UFO06761.5prime Sequence
1086 bp (967 high quality bases) assembled on 2009-08-24
> UFO06761.5prime
CAGTCGACATGACCAAAAAACTAGCTCTGAAACGCAGAGGAAAGGATTCG
GAACCCACAAATGAAGTGGTGGCCAGTTCCGAGGCTTCCGAAAACGAGGA
GGAGGAGGAGGACCTGCTGCAAGCTGTAAAAGATCCCGGCGAAGATTCAA
CAGATGACGAGGGCATAGACCAGGAATACCACTCGGATTCCAGTGAGGAA
CTGCAGTTCGAGAGCGATGAGGAGGGCAACTACTTGGGCAGAAAGCAATC
TTCATCAGCTGAGGAAGATGAAGAAAGTAGTGATGAAGAGGATAATGAAG
AGGAGGAAAGCACTGATGGAGAGGAAGTGGAAGATGAGGAGAAGGATTCC
AAGTCAAAGCAAACAGACGATAAGCCCAGTGGAAGCGGTGCCGCGTCTAA
AAAAGCCCTTACAGCAGAGCTCCCGAAACGGGATAGCTCGAAGCCTGAGT
ATCAGGATTCAGATACCTCCGACGAGGAGGACATAAGAAATACTGTAGGC
AACATACCCATGCACTGGTACGACGAATACAAGCACATCGGTTACGACTG
GGATGCCAAGAAGATTATTAAACCACCACAAGGAGATCAAATTGATGAGT
TCCTGCGTAAGATCGAGGACCCAGACTTTTGGCGTACCGTCAAGGATCCA
CTTACCGGTCAGGATGTGCGCCTAACAGACGAGGACATTGCTCTGATCAA
GCGCATCGTTTCGGGTCGCATACCCAACAAGGATCACGAAGAGTATGAGC
CCTGGATCGAATGGTTCACATCGGAGGTGGAAAAGATGCCCATCAAGAAC
GTACCCGACCACAAACGCTCTTTCCTGCCCTCAGTTTCCGAGAAAAGCGC
GTCTCTCGCATGGTGCACGCCCTCAAATGGGCTGGATGAGACCACTGAGG
AAGTGGACGCGAGAGCAGCCAGCGGCGGTCCCAGTTCTACATGCTGTGGG
AACGGACACCAGTCGGGACCATGCGCGCATCACGATTCAGTCTCTTGCGC
CCAACGCGACTTCCCGGTCATGGCGAGTTCTTACAATCCACCGCCGAGTA
TCTTTTTCGATGCAGGGAGACAGATGCCTAACTAAG
UFO06761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5033-RA | 2514 | CG5033-RA | 69..1144 | 9..1071 | 4815 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17789917..17790877 | 109..1056 | 3915 | 97.2 | Plus |
| 2R | 25286936 | 2R | 17789747..17789849 | 9..111 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:30 has no hits.
UFO06761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:07 Download gff for
UFO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 49..1131 | 1..1071 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:36 Download gff for
UFO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 62..1144 | 1..1071 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:37 Download gff for
UFO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 62..1144 | 1..1071 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:37 Download gff for
UFO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17789740..17789848 | 1..110 | 96 | -> | Plus |
| 2R | 17789919..17790892 | 111..1071 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:36 Download gff for
UFO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13677245..13677353 | 1..110 | 96 | -> | Plus |
| arm_2R | 13677424..13678397 | 111..1071 | 97 | | Plus |
