UFO06762.5prime Sequence
1114 bp (997 high quality bases) assembled on 2009-08-24
> UFO06762.5prime
CAGTCGACATGGCCGATTCAGATTCGAATGAGGTCCTAATTGAGGAAATA
GACAGCAACGATGTGCCGGAAAACGAATTGGAGCAGTTCCAGGAGACAGA
GCCGCTGCGCGTGGTAGACATCATCGACTGCGATACAGACGGCGAACGGC
GCTGCATCGCTGATGACGAGGAGGAGGGTGCGCTGATTAAGCGCTACGTG
CAGGGTGTTCAGTGCCTAGAGTTCCCGGACTTCTGCACCAAGCTGGAGGC
CAGCGACGAGGATGAGGAGGGCAATGATGAGGAGCCCAGTGAGGCGGCCG
GCAGCATCGAGAAGCCGAACACTTCGGCGCAAGCGAAAACGTCACAGGAA
CAGTCGACGGGAAGTGGTCGTTCTGGAGGAGGTGGCTTTCGGAAAAGCCA
ACTAAGCACCGCCCTGCAAGGACTGATGGGCGAGGCCAATCTGAGCTTTG
TGTACGGCCGCTATGAAACAGCCGAGCGCATCTGCATGGAGATCATCCGA
CAGAATCCACTGGCCAGTGAACCGTTTTACACGCTGGCCGAGATTTATGA
GAACCGTGATGAGGTCAAGTTCCTGAACTTCTCCACATTGGCGGCCCACT
TGAATCCCCAGGACCGAGACATGTGGATACGTGTCTCCGATCTGCTGGTG
CAGCAGGGCAACTTGGCCCGTGCGCGTCTCATCTACACGAAGGCCATCAA
AATGCTGCCCAAAGTGTACCAGCTTCGCTGCGTAAGGCGCAGCTGTTGCA
AAAAATGGGCGAAACCAATGCCTCCATGTTTACGTACTTGAAAATGCTGC
CACTGATGCCCCCAGATGAGTGGAAAATGTGCCTGATACGGCCAAGAACG
TAGCCCGATACTTTCATGTGCTGGAGAAGCACTCGCTTGCCCTAGAGGCC
ATGGAGGGGGCGTACAGTGTGTGTGGTGCGCGATTCACCCTGGAGGATAT
AAACATCTACTTGGAACTGCTGATCCTAAATAACAGTATGCCAAGGTTCT
GCGGTGCCTGCGAGAGCGCACCATTTGGAGCTGAAACGAACAAGAAGGAG
AGTCTGACTTATATACTTCTGCGAGATCCAAATGAACTATGTCCCGACTG
CGTAGCTCTGCGTC
UFO06762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8950-RB | 3248 | CG8950-RB | 29..1122 | 9..1095 | 5170 | 98.7 | Plus |
| CG8950-RA | 2708 | CG8950-RA | 29..1122 | 9..1095 | 5170 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17061513..17062606 | 1095..9 | 4975 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:49 has no hits.
UFO06762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:06 Download gff for
UFO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8950-RA | 24..1131 | 1..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:15 Download gff for
UFO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8950-RA | 24..1131 | 1..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:09 Download gff for
UFO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8950-RA | 24..1131 | 1..1102 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:09 Download gff for
UFO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17061504..17062611 | 1..1102 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:15 Download gff for
UFO06762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12949009..12950116 | 1..1102 | 98 | | Minus |
