UFO06766.5prime Sequence
1098 bp (966 high quality bases) assembled on 2009-08-24
> UFO06766.5prime
CAGTCGACATGTTAAAGGACGCCCACCAGAAGTTGATTAAACATCGCCAA
TCGACGAAGCTCTCCATGACCGACTTCGCTTGTCAGGCGGCGCCTGTAAA
GCAGCCCCTGCCGCTAGAATTGCCGCTGCCTTTGTCAGTGCAGCTACAGC
TTTTAGCAAAGACTCCGACCAGTGATCACGCCCCAATGCACTCTACGCCT
CCGACGACCCCGCCTACGCCACCTCCTCTGCCCTTGAACATGAGTCAATC
GGCATCGGCGATAACGGAAGCTGCTACTCCAGAAAACAGTCTGCCTGCCA
CACCACCCTCAGAAGGTGCACTAGCTGTACCATCGGCCCCACAGGATCAC
TACAGCCTACGCTGGAACAACCACCAGAACCACATCCTGCGGGCATTCGA
TGCACTGCTGAAGACCAAAACGCTGGTGGACGTGACCCTGGTCTGCGCGG
AGACTTCGATCCGGGCTCACAAAATGGTGCTCTCCGCCTGTTCGCCCTTC
TTCCAGCGCGTCTTTGCGGAAACTCCCTGCAAGCACCCAGTTATAGTGCT
CAAGGATTTCCGGGGTTGGGTAGTGCAGGCCATTGTAGACTTTATGTACC
GCGGAGAGATCAGCGTGCCCCAGCAGAGACTCCAGACACTCATCCAGGCC
GGAGAGTCGCTTCAAGTCCGAGGCTTGGTGGAGAGCTCTGTCCCAGAACA
CACTCCCACACCGGCCGCTTCCCCCGATGATTTCGGGATGTTGGACACCT
CTATGCTGTCCTCTACCTTTGAGGACGAGTGTCCGACGATGGTCCGACCC
TCTAAGGTGGAAAGCTTTTGATGCCGTCCGCCCGACTGTTTGGCAACGCT
TCAAGCGCCATTGCTGCTCTAGGTTTGCGACGAAACGAGAGCAGGAGTCC
GACCGCGACTTGAGAGTGATCAGAGCTGGGAGGCAGTTCACTATGCACGA
CGTAGCAGCGCGACGCGCGCGCTCGGCGATGTGCCGCACGACTTACTTAA
ACAAACGATGCAGATCTGCAACTGTGATCAGCACGAGCTTCTAACCGAGC
GAAGAGAATCAGAAGAGTCCTGATCAAGATACGCAAGGGAGCTGAAAT
UFO06766.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lov-RF | 4185 | CG16778-RF | 548..1647 | 8..1081 | 4820 | 97.3 | Plus |
| lov-RE | 3826 | CG16778-RE | 189..1288 | 8..1081 | 4820 | 97.3 | Plus |
| lov-RD | 4712 | CG16778-RD | 443..1542 | 8..1081 | 4820 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25095527..25096464 | 941..8 | 4475 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:04:12 has no hits.
UFO06766.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:04 Download gff for
UFO06766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tkr-RA | 457..1582 | 1..1097 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:54 Download gff for
UFO06766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lov-RD | 438..1563 | 1..1097 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:56 Download gff for
UFO06766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lov-RD | 438..1563 | 1..1097 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:56 Download gff for
UFO06766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 25095344..25096469 | 1..1097 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:54 Download gff for
UFO06766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20982867..20983992 | 1..1097 | 96 | | Minus |
