UFO06768.5prime Sequence
812 bp (141 high quality bases) assembled on 2009-08-24
> UFO06768.5prime
CAATCCACATGCCCGCCCACTGCGCCGTGATAAATTGCATCCATAAGTAT
GTGCACGCGGGCAGCATTTCATTTCACAGATTTCCATTCAAACGGAAGGA
TCTTCTACAGAAATGGAAGGAATTTACCCAAAGGAGTGCTCAGTGGATGC
CCTCAAAATGGAGTGCGCTGTGCATTCTGCACTTTGGTGATGAGGACTTT
AATTGCCGCAATAATCGGAAAACGCTTAAAAAAAATGCTGTGCCATCAAT
TAGGGTTTCGGAAGATGACTCCATGAGTGGGCACTTGGAACAGGTGTCCC
CAAGCAATAGGCCAACGCACAAGCGAACTCTTTCTAGTGCCGCCAAATCA
CCAACAAAAAGTGTTAAAGCCACTTGCCGCTTTTGTGGTTCCTCGGCCAT
CAGTTGCTCCTCGTTTGACAAAATTTTTGAGCTCTTTGGCATGATCCACA
ATTGCTTTCCTACGCTACAGATTCTTCAGGACGACACCTTGCCCAAGGAA
ATATGCCAGGAGTGCTGCCTCCAATTGGAGCGCTTTTCCCAGTTCAGCGA
TGTGGTGATGTTGGCGCACAGTGAATTGCAAAAAAAATACCGCCGACCAC
TGAAAATCTCACTCGAACCCTTGGTTCGTGTGAAACAGGAGGCCTGCGAG
AGCTCGGACAATCTTTTTCCTGATGAACTGGACATGGGTTTGGAGCATGA
CGATGGCTGCGATAAGGAAAAAACTGAACATTAGTTTCAGTTCTGCGAGT
TCCCTATGCTAAATGCCCAAGACATTATCAGAATTGTGATATCATGGATA
TAATCACTCTGG
UFO06768.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10431-RB | 2670 | CG10431-RB | 68..872 | 9..812 | 3490 | 95.7 | Plus |
| CG10431-RA | 3355 | CG10431-RA | 68..872 | 9..812 | 3490 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18974903..18975638 | 78..812 | 3135 | 95.4 | Plus |
| 2L | 23513712 | 2L | 18974777..18974847 | 9..79 | 340 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:48 has no hits.
UFO06768.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:02 Download gff for
UFO06768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..872 | 9..812 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:30 Download gff for
UFO06768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..872 | 9..812 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:35 Download gff for
UFO06768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..872 | 9..812 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:35 Download gff for
UFO06768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18974777..18974847 | 9..79 | 98 | -> | Plus |
| 2L | 18974905..18975638 | 80..812 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:30 Download gff for
UFO06768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18974777..18974847 | 9..79 | 98 | -> | Plus |
| arm_2L | 18974905..18975638 | 80..812 | 95 | | Plus |
