UFO06773.5prime Sequence
1070 bp (959 high quality bases) assembled on 2009-08-24
> UFO06773.5prime
CAGTCGACATGTCCGAGGAGCCCAAGCGACGCGAGTGGCCCTTCTTCACC
CTGATGGACGTGTACTTCAGCGACCAGGTTAACGATCCCTCACTACGTCT
CTTCTCGTCCACAAAGACGCTCAAGGAGACCCTGGACGACAGCGTCTTCG
AGGATGATCCAATTATCGCCTCGGCCATTGCGGCGGCCACCAGTGGCGCC
TACATGGACATTGATGAGCTCATCCGGCGACAGAAGGAGCGTGCCGCTCT
GGCCGCCGAGCGGAAATTGGCTGCCGCTGCCAGCGGAGGCACTGGTGACT
ACAAATTCGATCTGAAGCCCATGCTATCGAACAGCAAGTTTAACAGCAAC
AGCGAGATGGCCAAGCTATCAAAGAGCGTCGATGACCTCTCTATGCAGCA
GTACAAGATCAAGCAAGAGCTAATGCGCCAGCGGGAACAGGAGCAGCAGG
AGAACATGGTCAAGATCAAGCAGCACGTACGCCAGCAGCAGCAGCAGCAA
CACCAGCAGCAGCAGCAGCAACAACACCACCAGGCCCAGCAGCAGCAGCA
GCGATTTCTGGGCCACCAGCAGGCCATGTCGCAGCATCCACACCGTCTGT
CGTCCTCGTCGACGCCACCAGCTTTGCAGCACGCCCTGCAGCAGCAGCAA
CAGCACATGCTGCAGCAGCACCAGTTGCAGCAACAGCTGCAGCATCAGCA
GCAGCAGCAACACCAACAGCAATTGCAGCAGCAGCAGCAACAGCACCACC
AACTCGCTCATCCCCACCAGCCGCACACACCGCGCCCCAGTACGCCACCC
ACCACGGCGCAGCAGATCCACATCACGGCCACCCAGCACCAGGCCGCCCA
GCAGCAGCTCCATCAGCAGCAGCAGCAGCCGTCGCACAAGCAGCAGCATC
CTACGCCGATCCCACACCATCGATCAGTACCTGCTGTCGTGCACACTCAT
GCACATGTGCGCGCTCACTCCTGCAGATGATGGAGATGGTGATGTCACAT
CGCAGCGCGCAGATATTCAGCACACAACTTATCTGTCGTGCAGTTCCTAC
TCCACGATCTTCCGGAAACA
UFO06773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6118-RD | 4502 | CG6118-RD | 807..1744 | 9..941 | 4585 | 99.5 | Plus |
| CG6118-RC | 4505 | CG6118-RC | 807..1744 | 9..941 | 4585 | 99.5 | Plus |
| CG6118-RB | 4038 | CG6118-RB | 340..1277 | 9..941 | 4585 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15424073..15425010 | 941..9 | 4510 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:03:48 has no hits.
UFO06773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:47 Download gff for
UFO06773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6118-RC | 246..1194 | 1..946 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:36 Download gff for
UFO06773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6118-RB | 333..1281 | 1..946 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:42 Download gff for
UFO06773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6118-RB | 333..1281 | 1..946 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:42 Download gff for
UFO06773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15424073..15425017 | 1..941 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:36 Download gff for
UFO06773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11249795..11250739 | 1..941 | 99 | | Minus |
